SOLTUB.AGRIA.G00000021653

Description : Chitinase

Gene families : OG_02_0006178 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021653
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_39

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0005975	carbohydrate metabolic process	IEA	AHRD
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	AHRD
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
MF	GO:0008061	chitin binding	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008843	endochitinase activity	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009627	systemic acquired resistance	IEA	AHRD
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	None	Extended
BP	GO:0009987	cellular process	IEA	AHRD
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010262	somatic embryogenesis	IEA	AHRD
BP	GO:0010272	response to silver ion	IEA	AHRD
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031099	regeneration	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072722	response to amitrole	IEA	AHRD
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004470	malic enzyme activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
CC	GO:0005813	centrosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005815	microtubule organizing center	IEP	Predict GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006107	oxaloacetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006108	malate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006734	NADH metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009117	nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010043	response to zinc ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010053	root epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016615	malate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019674	NAD metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030060	L-malate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048468	cell development	IEP	Predict GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090407	organophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090627	plant epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036861	Endochitinase-like_sf	29	68
IPR023346	Lysozyme-like_dom_sf	80	284
IPR000726	Glyco_hydro_19_cat	83	229
IPR000726	Glyco_hydro_19_cat	237	284

External Links

No external refs found!

SOLTUB.AGRIA.G00000021653

Expression Profile

Co-expression Networks

Functional Annotation