SOLTUB.AGRIA.G00000021796

Description : CHY-type/CTCHY-type/RING-type Zinc finger protein

Gene families : OG_02_0002799 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021796
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_82

Type	GO Term	Name	Evidence	Source
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002832	negative regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006879	cellular iron ion homeostasis	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009896	positive regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010119	regulation of stomatal movement	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031331	positive regulation of cellular catabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032102	negative regulation of response to external stimulus	None	Extended
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042176	regulation of protein catabolic process	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045732	positive regulation of protein catabolic process	None	Extended
BP	GO:0045862	positive regulation of proteolysis	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055072	iron ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061136	regulation of proteasomal protein catabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900424	regulation of defense response to bacterium	None	Extended
BP	GO:1900425	negative regulation of defense response to bacterium	IEA	AHRD
BP	GO:1901483	regulation of transcription factor catabolic process	None	Extended
BP	GO:1901485	positive regulation of transcription factor catabolic process	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901800	positive regulation of proteasomal protein catabolic process	None	Extended
BP	GO:1902456	regulation of stomatal opening	IEA	AHRD
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903052	positive regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002218	activation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002252	immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002253	activation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009734	auxin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009880	embryonic pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010015	root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010022	meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010030	positive regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010101	post-embryonic root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010102	lateral root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010286	heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010432	bract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010451	floral meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010582	floral meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016143	S-glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019757	glycosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019760	glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034059	response to anoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0035266	meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0045089	positive regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048825	cotyledon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050826	response to freezing	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0070417	cellular response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0071453	cellular response to oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0071454	cellular response to anoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071456	cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071497	cellular response to freezing	IEP	Predict GO terms from Neighborhoods
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090708	specification of plant organ axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901332	negative regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:2000023	regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000069	regulation of post-embryonic root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR008913	Znf_CHY	18	98
IPR037274	Znf_CHY_sf	15	87
IPR039512	RCHY1_zinc-ribbon	144	202

External Links

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SOLTUB.AGRIA.G00000021796

Expression Profile

Co-expression Networks

Functional Annotation