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  5. SOLTUB.AGRIA.G00000021938

SOLTUB.AGRIA.G00000021938


Description : Photosystem ii 22 kDa protein, chloroplastic


Gene families : OG_02_0015244 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021938
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_152


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
CC GO:0009517 PSII associated light-harvesting complex II IEA AHRD
CC GO:0009523 photosystem II IEA AHRD
BP GO:0009637 response to blue light IEA AHRD
BP GO:0009644 response to high light intensity IEA AHRD
BP GO:0010027 thylakoid membrane organization IEA AHRD
BP GO:0010114 response to red light IEA AHRD
BP GO:0010196 nonphotochemical quenching IEA AHRD
BP GO:0015979 photosynthesis IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
MF GO:0016168 chlorophyll binding IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
MF GO:0051219 phosphoprotein binding IEA AHRD
MF GO:0051738 xanthophyll binding IEA AHRD
BP GO:0080167 response to karrikin IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000427 plastid-encoded plastid RNA polymerase complex IEP Predict GO terms from Neighborhoods
MF GO:0000900 mRNA regulatory element binding translation repressor activity IEP Predict GO terms from Neighborhoods
BP GO:0002082 regulation of oxidative phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0003987 acetate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004096 catalase activity IEP Predict GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Predict GO terms from Neighborhoods
CC GO:0005960 glycine cleavage complex IEP Predict GO terms from Neighborhoods
BP GO:0005983 starch catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006144 purine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006522 alanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006524 alanine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006544 glycine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006545 glycine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006546 glycine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006565 L-serine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006730 one-carbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006760 folic acid-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0008453 alanine-glyoxylate transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0008974 phosphoribulokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009071 serine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009078 pyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009080 pyruvate family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009113 purine nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0009526 plastid envelope IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009575 chromoplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Predict GO terms from Neighborhoods
BP GO:0009688 abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Predict GO terms from Neighborhoods
BP GO:0009853 photorespiration IEP Predict GO terms from Neighborhoods
CC GO:0009941 chloroplast envelope IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0010117 photoprotection IEP Predict GO terms from Neighborhoods
BP GO:0010205 photoinhibition IEP Predict GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
CC GO:0010287 plastoglobule IEP Predict GO terms from Neighborhoods
MF GO:0010297 heteropolysaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
MF GO:0010436 carotenoid dioxygenase activity IEP Predict GO terms from Neighborhoods
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IEP Predict GO terms from Neighborhoods
BP GO:0014075 response to amine IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016110 tetraterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016118 carotenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016119 carotene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016120 carotene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016121 carotene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016122 xanthophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016123 xanthophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016124 xanthophyll catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Predict GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Predict GO terms from Neighborhoods
MF GO:0016207 4-coumarate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016594 glycine binding IEP Predict GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Predict GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Predict GO terms from Neighborhoods
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Predict GO terms from Neighborhoods
MF GO:0016824 hydrolase activity, acting on acid halide bonds IEP Predict GO terms from Neighborhoods
BP GO:0017014 protein nitrosylation IEP Predict GO terms from Neighborhoods
MF GO:0018786 haloalkane dehalogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0018858 benzoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0018884 carbazole metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019120 hydrolase activity, acting on acid halide bonds, in C-halide compounds IEP Predict GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019253 reductive pentose-phosphate cycle IEP Predict GO terms from Neighborhoods
BP GO:0019264 glycine biosynthetic process from serine IEP Predict GO terms from Neighborhoods
BP GO:0019464 glycine decarboxylation via glycine cleavage system IEP Predict GO terms from Neighborhoods
BP GO:0019605 butyrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019685 photosynthesis, dark reaction IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Predict GO terms from Neighborhoods
CC GO:0031676 plasma membrane-derived thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0031977 thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033483 gas homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0033484 nitric oxide homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0034340 response to type I interferon IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0035999 tetrahydrofolate interconversion IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0036255 response to methylamine IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
BP GO:0042558 pteridine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042579 microbody IEP Predict GO terms from Neighborhoods
CC GO:0042597 periplasmic space IEP Predict GO terms from Neighborhoods
CC GO:0042645 mitochondrial nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0042717 plasma membrane-derived chromatophore membrane IEP Predict GO terms from Neighborhoods
BP GO:0042851 L-alanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0043289 apocarotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043759 methylbutanoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0046232 carbazole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046247 terpene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046459 short-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046653 tetrahydrofolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046655 folic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
MF GO:0046863 ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0047760 butyrate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0047958 glycine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047960 glycine dehydrogenase activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048564 photosystem I assembly IEP Predict GO terms from Neighborhoods
MF GO:0050218 propionate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0061635 regulation of protein complex stability IEP Predict GO terms from Neighborhoods
BP GO:0062125 regulation of mitochondrial gene expression IEP Predict GO terms from Neighborhoods
BP GO:0070125 mitochondrial translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0070129 regulation of mitochondrial translation IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
MF GO:0070280 pyridoxal binding IEP Predict GO terms from Neighborhoods
BP GO:0070536 protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0070552 BRISC complex IEP Predict GO terms from Neighborhoods
MF GO:0070905 serine binding IEP Predict GO terms from Neighborhoods
BP GO:0071277 cellular response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0071369 cellular response to ethylene stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0097573 glutathione oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0097718 disordered domain specific binding IEP Predict GO terms from Neighborhoods
MF GO:0102229 amylopectin maltohydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0102655 1-18:1-2-trans-16:1-phosphatidylglycerol desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0102834 1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0102836 1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0102838 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0102841 1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0102844 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (SN2-16:2 forming) IEP Predict GO terms from Neighborhoods
MF GO:0102850 1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0102873 1-18:1-2-16:0-digalactosyldiacylglycerol desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0106286 (E)-caffeate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106290 trans-cinnamate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0120253 hydrocarbon catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0120254 olefinic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901175 lycopene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901177 lycopene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901810 beta-carotene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901812 beta-carotene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902645 tertiary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903409 reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903442 response to lipoic acid IEP Predict GO terms from Neighborhoods
BP GO:1903715 regulation of aerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:1905156 negative regulation of photosynthesis IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 92 222
No external refs found!