SOLTUB.AGRIA.G00000022188


Description : Unknown protein


Gene families : OG_02_0043910 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022188
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000070 mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0000154 rRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0000245 spliceosomal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000451 rRNA 2'-O-methylation IEP Predict GO terms from Neighborhoods
BP GO:0000494 box C/D RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0000819 sister chromatid segregation IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001094 TFIID-class transcription factor complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001221 transcription coregulator binding IEP Predict GO terms from Neighborhoods
MF GO:0001223 transcription coactivator binding IEP Predict GO terms from Neighborhoods
CC GO:0001651 dense fibrillar component IEP Predict GO terms from Neighborhoods
CC GO:0001652 granular component IEP Predict GO terms from Neighborhoods
BP GO:0001831 trophectodermal cellular morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001835 blastocyst hatching IEP Predict GO terms from Neighborhoods
BP GO:0002181 cytoplasmic translation IEP Predict GO terms from Neighborhoods
BP GO:0002761 regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002762 negative regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0003360 brainstem development IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004165 delta(3)-delta(2)-enoyl-CoA isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004300 enoyl-CoA hydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005112 Notch binding IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005827 polar microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006356 regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006901 vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0007000 nucleolus organization IEP Predict GO terms from Neighborhoods
BP GO:0007080 mitotic metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0007229 integrin-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007369 gastrulation IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008692 3-hydroxybutyryl-CoA epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009423 chorismate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009895 negative regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010390 histone monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0010421 hydrogen peroxide-mediated programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
CC GO:0015030 Cajal body IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0016055 Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0016074 sno(s)RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016574 histone ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Predict GO terms from Neighborhoods
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0017126 nucleologenesis IEP Predict GO terms from Neighborhoods
BP GO:0017145 stem cell division IEP Predict GO terms from Neighborhoods
BP GO:0018364 peptidyl-glutamine methylation IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0021987 cerebral cortex development IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
BP GO:0022612 gland morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0030218 erythrocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030332 cyclin binding IEP Predict GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0030852 regulation of granulocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030853 negative regulation of granulocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0031126 sno(s)RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Predict GO terms from Neighborhoods
MF GO:0031208 POZ domain binding IEP Predict GO terms from Neighborhoods
BP GO:0031330 negative regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031396 regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031397 negative regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031400 negative regulation of protein modification process IEP Predict GO terms from Neighborhoods
CC GO:0031428 box C/D RNP complex IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031465 Cul4B-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031514 motile cilium IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0031647 regulation of protein stability IEP Predict GO terms from Neighborhoods
CC GO:0031672 A band IEP Predict GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Predict GO terms from Neighborhoods
BP GO:0032467 positive regulation of cytokinesis IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033522 histone H2A ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0033967 box C/D RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034963 box C/D RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035019 somatic stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0035023 regulation of Rho protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0035024 negative regulation of Rho protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0035188 hatching IEP Predict GO terms from Neighborhoods
BP GO:0035518 histone H2A monoubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0036009 protein-glutamine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0036126 sperm flagellum IEP Predict GO terms from Neighborhoods
BP GO:0036473 cell death in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0036474 cell death in response to hydrogen peroxide IEP Predict GO terms from Neighborhoods
BP GO:0040016 embryonic cleavage IEP Predict GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042752 regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
CC GO:0042788 polysomal ribosome IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043144 sno(s)RNA processing IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044346 fibroblast apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045638 negative regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045840 positive regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045842 positive regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0046417 chorismate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046580 negative regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0046677 response to antibiotic IEP Predict GO terms from Neighborhoods
BP GO:0048208 COPII vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0048254 snoRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050821 protein stabilization IEP Predict GO terms from Neighborhoods
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051310 metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051385 response to mineralocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051438 regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051444 negative regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0055105 ubiquitin-protein transferase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0055106 ubiquitin-protein transferase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0070180 large ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Predict GO terms from Neighborhoods
BP GO:0070453 regulation of heme biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070914 UV-damage excision repair IEP Predict GO terms from Neighborhoods
CC GO:0071014 post-mRNA release spliceosomal complex IEP Predict GO terms from Neighborhoods
BP GO:0071236 cellular response to antibiotic IEP Predict GO terms from Neighborhoods
BP GO:0071310 cellular response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0071495 cellular response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP Predict GO terms from Neighborhoods
BP GO:0071684 organism emergence from protective structure IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072576 liver morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072716 response to actinomycin D IEP Predict GO terms from Neighborhoods
BP GO:0072717 cellular response to actinomycin D IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Predict GO terms from Neighborhoods
CC GO:0097729 9+2 motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098554 cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098562 cytoplasmic side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predict GO terms from Neighborhoods
BP GO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901652 response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901653 cellular response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1901796 regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901798 positive regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901970 positive regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:1901976 regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902105 regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902106 negative regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902533 positive regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902808 positive regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903050 regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903321 negative regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903707 negative regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1904044 response to aldosterone IEP Predict GO terms from Neighborhoods
BP GO:1904666 regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1904667 negative regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1990258 histone glutamine methylation IEP Predict GO terms from Neighborhoods
MF GO:1990259 histone-glutamine methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1990416 cellular response to brain-derived neurotrophic factor stimulus IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:1990948 ubiquitin ligase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:2000001 regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000819 regulation of nucleotide-excision repair IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!