SOLTUB.AGRIA.G00000022309

Description : Mannan endo-1,4-beta-mannosidase 1

Gene families : OG_02_0002201 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022309
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_53

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004567	beta-mannosidase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	IEA	AHRD
BP	GO:0009845	seed germination	IEA	AHRD
BP	GO:0009900	dehiscence	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010047	fruit dehiscence	IEA	AHRD
MF	GO:0015923	mannosidase activity	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016985	mannan endo-1,4-beta-mannosidase activity	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0061687	detoxification of inorganic compound	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071585	detoxification of cadmium ion	IEA	AHRD
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	IEA	AHRD
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0071944	cell periphery	IEA	AHRD
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1990059	fruit valve development	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008300	isoprenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009395	phospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009403	toxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009404	toxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009685	gibberellin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009686	gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0009899	ent-kaurene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016101	diterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016103	diterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016115	terpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
BP	GO:0033331	ent-kaurene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033332	ent-kaurene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042214	terpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046246	terpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051501	diterpene phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051502	diterpene phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052314	phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0062205	miltiradiene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102060	endo-alpha-bergamotene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102061	endo-beta-bergamotene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102062	alpha-santalene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0120252	hydrocarbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901944	miltiradiene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901946	miltiradiene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902241	copal-8-ol diphosphate(3-) metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902242	copal-8-ol diphosphate(3-) catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902244	cis-abienol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902246	cis-abienol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	81	321
IPR017853	Glycoside_hydrolase_SF	37	368

External Links

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SOLTUB.AGRIA.G00000022309

Expression Profile

Co-expression Networks

Functional Annotation