SOLTUB.AGRIA.G00000022337

Description : F-box and associated interaction domains-containing protein

Gene families : OG_02_0006212 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022337
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_198

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	IEA	AHRD
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0010029	regulation of seed germination	IEA	AHRD
BP	GO:0016567	protein ubiquitination	IEA	AHRD
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005049	nuclear export signal receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005643	nuclear pore	IEP	Predict GO terms from Neighborhoods
CC	GO:0005662	DNA replication factor A complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006611	protein export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006990	positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	IEP	Predict GO terms from Neighborhoods
CC	GO:0009317	acetyl-CoA carboxylase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016421	CoA carboxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035384	thioester biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901522	positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:2001293	malonyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001295	malonyl-CoA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006527	F-box-assoc_dom_typ1	227	337
IPR036047	F-box-like_dom_sf	19	75
IPR017451	F-box-assoc_interact_dom	131	352
IPR001810	F-box_dom	21	59

External Links

No external refs found!

SOLTUB.AGRIA.G00000022337

Expression Profile

Co-expression Networks

Functional Annotation