SOLTUB.AGRIA.G00000022650

Description : Dof zinc finger protein

Gene families : OG_02_0015352 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022650
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_216

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009625	response to insect	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009838	abscission	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEA	AHRD
BP	GO:0009956	radial pattern formation	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010052	guard cell differentiation	IEA	AHRD
BP	GO:0010087	phloem or xylem histogenesis	IEA	AHRD
BP	GO:0010118	stomatal movement	IEA	AHRD
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010227	floral organ abscission	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010439	regulation of glucosinolate biosynthetic process	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010496	intercellular transport	None	Extended
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042545	cell wall modification	IEA	AHRD
BP	GO:0042762	regulation of sulfur metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0043455	regulation of secondary metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045787	positive regulation of cell cycle	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
CC	GO:0055044	symplast	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0062012	regulation of small molecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090057	root radial pattern formation	IEA	AHRD
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902066	regulation of cell wall pectin metabolic process	IEA	AHRD
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000280	regulation of root development	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007267	cell-cell signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
MF	GO:0008066	glutamate receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009799	specification of symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010014	meristem initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010034	response to acetate	IEP	Predict GO terms from Neighborhoods
BP	GO:0010074	maintenance of meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010075	regulation of meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010082	regulation of root meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010119	regulation of stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010150	leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predict GO terms from Neighborhoods
BP	GO:0019722	calcium-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0019827	stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0043200	response to amino acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0048511	rhythmic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048576	positive regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048580	regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048581	negative regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048584	positive regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0048586	regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048826	cotyledon morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071230	cellular response to amino acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071260	cellular response to mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071311	cellular response to acetate	IEP	Predict GO terms from Neighborhoods
BP	GO:0071478	cellular response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071482	cellular response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0080022	primary root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0080113	regulation of seed growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090506	axillary shoot meristem initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090693	plant organ senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0098727	maintenance of cell number	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905428	regulation of plant organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1990110	callus formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000026	regulation of multicellular organismal development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:2000031	regulation of salicylic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000242	negative regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	32	88

External Links

No external refs found!

SOLTUB.AGRIA.G00000022650

Expression Profile

Co-expression Networks

Functional Annotation