SOLTUB.AGRIA.G00000022716

Description : ABC transporter A family protein

Gene families : OG_02_0009592 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022716
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_189

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
CC	GO:0001891	phagocytic cup	IEA	AHRD
BP	GO:0003008	system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005319	lipid transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
MF	GO:0005548	phospholipid transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	None	Extended
CC	GO:0005770	late endosome	IEA	AHRD
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007166	cell surface receptor signaling pathway	None	Extended
BP	GO:0007610	behavior	None	Extended
BP	GO:0007611	learning or memory	None	Extended
BP	GO:0007612	learning	None	Extended
BP	GO:0007613	memory	IEA	AHRD
BP	GO:0007632	visual behavior	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008306	associative learning	None	Extended
MF	GO:0008525	phosphatidylcholine transporter activity	IEA	AHRD
BP	GO:0008542	visual learning	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009913	epidermal cell differentiation	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
CC	GO:0009986	cell surface	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010559	regulation of glycoprotein biosynthetic process	None	Extended
BP	GO:0010561	negative regulation of glycoprotein biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010874	regulation of cholesterol efflux	None	Extended
BP	GO:0010875	positive regulation of cholesterol efflux	IEA	AHRD
CC	GO:0012506	vesicle membrane	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016324	apical plasma membrane	IEA	AHRD
BP	GO:0018149	peptide cross-linking	IEA	AHRD
BP	GO:0019216	regulation of lipid metabolic process	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	IEA	AHRD
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030100	regulation of endocytosis	None	Extended
CC	GO:0030141	secretory granule	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030216	keratinocyte differentiation	IEA	AHRD
MF	GO:0030226	apolipoprotein receptor activity	None	Extended
BP	GO:0030324	lung development	IEA	AHRD
BP	GO:0030587	sorocarp development	IEA	AHRD
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0030667	secretory granule membrane	None	Extended
BP	GO:0030855	epithelial cell differentiation	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031253	cell projection membrane	None	Extended
CC	GO:0031256	leading edge membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
BP	GO:0031579	membrane raft organization	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032368	regulation of lipid transport	None	Extended
BP	GO:0032370	positive regulation of lipid transport	None	Extended
BP	GO:0032371	regulation of sterol transport	None	Extended
BP	GO:0032373	positive regulation of sterol transport	None	Extended
BP	GO:0032374	regulation of cholesterol transport	None	Extended
BP	GO:0032376	positive regulation of cholesterol transport	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032587	ruffle membrane	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0034188	apolipoprotein A-I receptor activity	IEA	AHRD
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
BP	GO:0034249	negative regulation of cellular amide metabolic process	None	Extended
BP	GO:0034504	protein localization to nucleus	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0038024	cargo receptor activity	None	Extended
BP	GO:0038027	apolipoprotein A-I-mediated signaling pathway	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042599	lamellar body	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
BP	GO:0042984	regulation of amyloid precursor protein biosynthetic process	None	Extended
BP	GO:0042985	negative regulation of amyloid precursor protein biosynthetic process	IEA	AHRD
CC	GO:0042995	cell projection	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043408	regulation of MAPK cascade	None	Extended
BP	GO:0043409	negative regulation of MAPK cascade	IEA	AHRD
BP	GO:0043410	positive regulation of MAPK cascade	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044857	plasma membrane raft organization	IEA	AHRD
BP	GO:0045806	negative regulation of endocytosis	IEA	AHRD
BP	GO:0045807	positive regulation of endocytosis	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048871	multicellular organismal homeostasis	IEA	AHRD
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050764	regulation of phagocytosis	None	Extended
BP	GO:0050766	positive regulation of phagocytosis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050877	nervous system process	None	Extended
BP	GO:0050890	cognition	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051050	positive regulation of transport	None	Extended
BP	GO:0051051	negative regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	None	Extended
BP	GO:0055085	transmembrane transport	IEA	AHRD
BP	GO:0055088	lipid homeostasis	IEA	AHRD
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060099	regulation of phagocytosis, engulfment	None	Extended
BP	GO:0060100	positive regulation of phagocytosis, engulfment	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070372	regulation of ERK1 and ERK2 cascade	None	Extended
BP	GO:0070374	positive regulation of ERK1 and ERK2 cascade	IEA	AHRD
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097208	alveolar lamellar body	IEA	AHRD
CC	GO:0097232	lamellar body membrane	IEA	AHRD
BP	GO:0097242	amyloid-beta clearance	None	Extended
CC	GO:0097386	glial cell projection	IEA	AHRD
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
BP	GO:0099120	socially cooperative development	None	Extended
CC	GO:0099503	secretory vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
MF	GO:0140303	intramembrane lipid transporter activity	None	Extended
MF	GO:0140326	ATPase-coupled intramembrane lipid transporter activity	None	Extended
MF	GO:0140328	floppase activity	IEA	AHRD
MF	GO:0140359	ABC-type transporter activity	IEA	AHRD
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:0150094	amyloid-beta clearance by cellular catabolic process	IEA	AHRD
BP	GO:1900101	regulation of endoplasmic reticulum unfolded protein response	None	Extended
BP	GO:1900102	negative regulation of endoplasmic reticulum unfolded protein response	None	Extended
BP	GO:1900221	regulation of amyloid-beta clearance	None	Extended
BP	GO:1900223	positive regulation of amyloid-beta clearance	IEA	AHRD
BP	GO:1901074	regulation of engulfment of apoptotic cell	None	Extended
BP	GO:1901076	positive regulation of engulfment of apoptotic cell	IEA	AHRD
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902003	regulation of amyloid-beta formation	None	Extended
BP	GO:1902430	negative regulation of amyloid-beta formation	IEA	AHRD
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902532	negative regulation of intracellular signal transduction	None	Extended
BP	GO:1902533	positive regulation of intracellular signal transduction	None	Extended
BP	GO:1902991	regulation of amyloid precursor protein catabolic process	None	Extended
BP	GO:1902992	negative regulation of amyloid precursor protein catabolic process	None	Extended
BP	GO:1902994	regulation of phospholipid efflux	None	Extended
BP	GO:1902995	positive regulation of phospholipid efflux	IEA	AHRD
BP	GO:1903018	regulation of glycoprotein metabolic process	None	Extended
BP	GO:1903019	negative regulation of glycoprotein metabolic process	None	Extended
BP	GO:1903573	negative regulation of response to endoplasmic reticulum stress	None	Extended
BP	GO:1903829	positive regulation of protein localization	None	Extended
BP	GO:1903897	regulation of PERK-mediated unfolded protein response	None	Extended
BP	GO:1903898	negative regulation of PERK-mediated unfolded protein response	IEA	AHRD
BP	GO:1905153	regulation of membrane invagination	None	Extended
BP	GO:1905155	positive regulation of membrane invagination	None	Extended
BP	GO:1905897	regulation of response to endoplasmic reticulum stress	None	Extended
BP	GO:1905952	regulation of lipid localization	None	Extended
BP	GO:1905954	positive regulation of lipid localization	None	Extended
BP	GO:2000008	regulation of protein localization to cell surface	None	Extended
BP	GO:2000010	positive regulation of protein localization to cell surface	IEA	AHRD
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000425	regulation of apoptotic cell clearance	None	Extended
BP	GO:2000427	positive regulation of apoptotic cell clearance	None	Extended
BP	GO:2001138	regulation of phospholipid transport	None	Extended
BP	GO:2001140	positive regulation of phospholipid transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006812	cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006826	iron ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009705	plant-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009809	lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009812	flavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009813	flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010038	response to metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010039	response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010043	response to zinc ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010249	auxin conjugate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015245	fatty acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015603	iron chelate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016046	detection of fungus	IEP	Predict GO terms from Neighborhoods
MF	GO:0016208	AMP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018874	benzoate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0018958	phenol-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0034052	positive regulation of plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
BP	GO:0034220	ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034755	iron ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046688	response to copper ion	IEP	Predict GO terms from Neighborhoods
CC	GO:0048226	Casparian strip	IEP	Predict GO terms from Neighborhoods
BP	GO:0048316	seed development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048608	reproductive structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051176	positive regulation of sulfur metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0051980	iron-nicotianamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052318	regulation of phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052319	regulation of phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052320	positive regulation of phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052322	positive regulation of phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052625	4-aminobenzoate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052626	benzoate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052627	vanillate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052628	4-hydroxybenzoate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060148	positive regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
MF	GO:0070406	glutamine binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0098655	cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0102053	(-)-jasmonoyl-isoleucine synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102057	jasmonoyl-valine synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102058	jasmonoyl-leucine synthetase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900368	regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1900370	positive regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1901182	regulation of camalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901183	positive regulation of camalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR027417	P-loop_NTPase	575	800
IPR003439	ABC_transporter-like_ATP-bd	593	737

External Links

No external refs found!

SOLTUB.AGRIA.G00000022716

Expression Profile

Co-expression Networks

Functional Annotation