1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000002388

SOLTUB.AGRIA.G00000002388


Description : asterix-like protein


Gene families : OG_02_0024504 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002388
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000070 mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000243 commitment complex IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000451 rRNA 2'-O-methylation IEP Predict GO terms from Neighborhoods
BP GO:0000494 box C/D RNA 3'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0000803 sex chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000805 X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0000819 sister chromatid segregation IEP Predict GO terms from Neighborhoods
MF GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001056 RNA polymerase III activity IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001094 TFIID-class transcription factor complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001221 transcription coregulator binding IEP Predict GO terms from Neighborhoods
MF GO:0001223 transcription coactivator binding IEP Predict GO terms from Neighborhoods
BP GO:0001501 skeletal system development IEP Predict GO terms from Neighborhoods
BP GO:0001649 osteoblast differentiation IEP Predict GO terms from Neighborhoods
CC GO:0001651 dense fibrillar component IEP Predict GO terms from Neighborhoods
CC GO:0001652 granular component IEP Predict GO terms from Neighborhoods
CC GO:0001740 Barr body IEP Predict GO terms from Neighborhoods
MF GO:0001882 nucleoside binding IEP Predict GO terms from Neighborhoods
BP GO:0002181 cytoplasmic translation IEP Predict GO terms from Neighborhoods
BP GO:0003360 brainstem development IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0004165 delta(3)-delta(2)-enoyl-CoA isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004300 enoyl-CoA hydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0004363 glutathione synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Predict GO terms from Neighborhoods
CC GO:0005684 U2-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005736 RNA polymerase I complex IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006356 regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006360 transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006386 termination of RNA polymerase III transcription IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006750 glutathione biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0007000 nucleolus organization IEP Predict GO terms from Neighborhoods
BP GO:0007338 single fertilization IEP Predict GO terms from Neighborhoods
BP GO:0007420 brain development IEP Predict GO terms from Neighborhoods
BP GO:0007498 mesoderm development IEP Predict GO terms from Neighborhoods
BP GO:0007566 embryo implantation IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008584 male gonad development IEP Predict GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008692 3-hydroxybutyryl-CoA epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009304 tRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0010390 histone monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0015935 small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predict GO terms from Neighborhoods
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Predict GO terms from Neighborhoods
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
BP GO:0017126 nucleologenesis IEP Predict GO terms from Neighborhoods
BP GO:0018364 peptidyl-glutamine methylation IEP Predict GO terms from Neighborhoods
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0021987 cerebral cortex development IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0022627 cytosolic small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
MF GO:0030628 pre-mRNA 3'-splice site binding IEP Predict GO terms from Neighborhoods
CC GO:0030875 rDNA protrusion IEP Predict GO terms from Neighborhoods
BP GO:0031126 sno(s)RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0031330 negative regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:0031396 regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031397 negative regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0031428 box C/D RNP complex IEP Predict GO terms from Neighborhoods
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031465 Cul4B-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
MF GO:0031492 nucleosomal DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031508 pericentric heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031509 subtelomeric heterochromatin formation IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0031672 A band IEP Predict GO terms from Neighborhoods
BP GO:0032481 positive regulation of type I interferon production IEP Predict GO terms from Neighborhoods
MF GO:0032549 ribonucleoside binding IEP Predict GO terms from Neighborhoods
BP GO:0032648 regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032728 positive regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:0033291 eukaryotic 80S initiation complex IEP Predict GO terms from Neighborhoods
BP GO:0033522 histone H2A ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0033967 box C/D RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034463 90S preribosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034963 box C/D RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035518 histone H2A monoubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0036009 protein-glutamine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042474 middle ear morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042692 muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042752 regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
CC GO:0042788 polysomal ribosome IEP Predict GO terms from Neighborhoods
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0043009 chordate embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043144 sno(s)RNA processing IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0046677 response to antibiotic IEP Predict GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048254 snoRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0048318 axial mesoderm development IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0050733 RS domain binding IEP Predict GO terms from Neighborhoods
BP GO:0050821 protein stabilization IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051385 response to mineralocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051438 regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051444 negative regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0055105 ubiquitin-protein transferase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0055106 ubiquitin-protein transferase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0060623 regulation of chromosome condensation IEP Predict GO terms from Neighborhoods
MF GO:0070180 large ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Predict GO terms from Neighborhoods
BP GO:0070453 regulation of heme biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070914 UV-damage excision repair IEP Predict GO terms from Neighborhoods
CC GO:0070992 translation initiation complex IEP Predict GO terms from Neighborhoods
CC GO:0071013 catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0071236 cellular response to antibiotic IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0071495 cellular response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072716 response to actinomycin D IEP Predict GO terms from Neighborhoods
BP GO:0072717 cellular response to actinomycin D IEP Predict GO terms from Neighborhoods
CC GO:0089701 U2AF complex IEP Predict GO terms from Neighborhoods
BP GO:0090230 regulation of centromere complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098554 cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098562 cytoplasmic side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predict GO terms from Neighborhoods
BP GO:0140719 constitutive heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901653 cellular response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1901796 regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901798 positive regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902340 negative regulation of chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903321 negative regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1904044 response to aldosterone IEP Predict GO terms from Neighborhoods
MF GO:1904091 non-ribosomal peptide synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:1904526 regulation of microtubule binding IEP Predict GO terms from Neighborhoods
BP GO:1904666 regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1904667 negative regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1990258 histone glutamine methylation IEP Predict GO terms from Neighborhoods
MF GO:1990259 histone-glutamine methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1990416 cellular response to brain-derived neurotrophic factor stimulus IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:1990948 ubiquitin ligase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005351 ASTER 4 78
No external refs found!