1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000023042

SOLTUB.AGRIA.G00000023042


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG_02_0020128 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023042
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_233


Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0032501 multicellular organismal process IEA AHRD
BP GO:0098542 defense response to other organism IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0000820 regulation of glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0000904 cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001655 urogenital system development IEP Predict GO terms from Neighborhoods
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Predict GO terms from Neighborhoods
BP GO:0001889 liver development IEP Predict GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005154 epidermal growth factor receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006282 regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006304 DNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006305 DNA alkylation IEP Predict GO terms from Neighborhoods
BP GO:0006306 DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006702 androgen biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006706 steroid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006710 androgen catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007622 rhythmic behavior IEP Predict GO terms from Neighborhoods
BP GO:0008207 C21-steroid hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008209 androgen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008406 gonad development IEP Predict GO terms from Neighborhoods
MF GO:0008422 beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008584 male gonad development IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009251 glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
MF GO:0009917 sterol 5-alpha reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010268 brassinosteroid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0014074 response to purine-containing compound IEP Predict GO terms from Neighborhoods
BP GO:0014823 response to activity IEP Predict GO terms from Neighborhoods
BP GO:0014850 response to muscle activity IEP Predict GO terms from Neighborhoods
MF GO:0015926 glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016049 cell growth IEP Predict GO terms from Neighborhoods
BP GO:0016093 polyprenol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016128 phytosteroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016129 phytosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016131 brassinosteroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016132 brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predict GO terms from Neighborhoods
BP GO:0018879 biphenyl metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018894 dibenzo-p-dioxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018963 phthalate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Predict GO terms from Neighborhoods
BP GO:0021510 spinal cord development IEP Predict GO terms from Neighborhoods
BP GO:0021766 hippocampus development IEP Predict GO terms from Neighborhoods
BP GO:0021794 thalamus development IEP Predict GO terms from Neighborhoods
BP GO:0021854 hypothalamus development IEP Predict GO terms from Neighborhoods
BP GO:0021983 pituitary gland development IEP Predict GO terms from Neighborhoods
BP GO:0021987 cerebral cortex development IEP Predict GO terms from Neighborhoods
BP GO:0022410 circadian sleep/wake cycle process IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0030104 water homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0030539 male genitalia development IEP Predict GO terms from Neighborhoods
BP GO:0030540 female genitalia development IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
MF GO:0032131 alkylated DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0032354 response to follicle-stimulating hormone IEP Predict GO terms from Neighborhoods
BP GO:0032355 response to estradiol IEP Predict GO terms from Neighborhoods
BP GO:0032868 response to insulin IEP Predict GO terms from Neighborhoods
BP GO:0032869 cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Predict GO terms from Neighborhoods
BP GO:0033238 regulation of cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033239 negative regulation of cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033574 response to testosterone IEP Predict GO terms from Neighborhoods
MF GO:0033765 steroid dehydrogenase activity, acting on the CH-CH group of donors IEP Predict GO terms from Neighborhoods
BP GO:0034698 response to gonadotropin IEP Predict GO terms from Neighborhoods
MF GO:0035671 enone reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042428 serotonin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042447 hormone catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042448 progesterone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042747 circadian sleep/wake cycle, REM sleep IEP Predict GO terms from Neighborhoods
MF GO:0042973 glucan endo-1,3-beta-D-glucosidase activity IEP Predict GO terms from Neighborhoods
CC GO:0043025 neuronal cell body IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043209 myelin sheath IEP Predict GO terms from Neighborhoods
BP GO:0043434 response to peptide hormone IEP Predict GO terms from Neighborhoods
BP GO:0043627 response to estrogen IEP Predict GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044247 cellular polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044275 cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044297 cell body IEP Predict GO terms from Neighborhoods
BP GO:0044728 DNA methylation or demethylation IEP Predict GO terms from Neighborhoods
BP GO:0045165 cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0045763 negative regulation of cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0046677 response to antibiotic IEP Predict GO terms from Neighborhoods
BP GO:0046683 response to organophosphorus IEP Predict GO terms from Neighborhoods
MF GO:0047751 cholestenone 5-alpha-reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0048512 circadian behavior IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0048589 developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048732 gland development IEP Predict GO terms from Neighborhoods
BP GO:0048806 genitalia development IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050213 progesterone 5-alpha-reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Predict GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060148 positive regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060348 bone development IEP Predict GO terms from Neighborhoods
BP GO:0060416 response to growth hormone IEP Predict GO terms from Neighborhoods
BP GO:0060560 developmental growth involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060964 regulation of miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060966 regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0060992 response to fungicide IEP Predict GO terms from Neighborhoods
BP GO:0061458 reproductive system development IEP Predict GO terms from Neighborhoods
BP GO:0062014 negative regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Predict GO terms from Neighborhoods
BP GO:0070534 protein K63-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0070848 response to growth factor IEP Predict GO terms from Neighborhoods
MF GO:0070851 growth factor receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0070852 cell body fiber IEP Predict GO terms from Neighborhoods
BP GO:0070936 protein K48-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0071320 cellular response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0071363 cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071383 cellular response to steroid hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071384 cellular response to corticosteroid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071385 cellular response to glucocorticoid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071392 cellular response to estradiol stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071394 cellular response to testosterone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071548 response to dexamethasone IEP Predict GO terms from Neighborhoods
BP GO:0071549 cellular response to dexamethasone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071867 response to monoamine IEP Predict GO terms from Neighborhoods
BP GO:0071868 cellular response to monoamine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071869 response to catecholamine IEP Predict GO terms from Neighborhoods
BP GO:0071870 cellular response to catecholamine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071871 response to epinephrine IEP Predict GO terms from Neighborhoods
BP GO:0071872 cellular response to epinephrine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0090377 seed trichome initiation IEP Predict GO terms from Neighborhoods
BP GO:0090378 seed trichome elongation IEP Predict GO terms from Neighborhoods
BP GO:0097164 ammonium ion metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0120178 steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0140718 facultative heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:1900368 regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900370 positive regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1901160 primary amino compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901653 cellular response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901654 response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1902005 regulation of proline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902006 negative regulation of proline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000214 regulation of proline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000215 negative regulation of proline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000282 regulation of cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000283 negative regulation of cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000637 positive regulation of miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004864 LEA_2 118 216
No external refs found!