SOLTUB.AGRIA.G00000023254


Description : Upf0503 protein, chloroplastic


Gene families : OG_02_0015474 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023254
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_100


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA AHRD
BP GO:0032501 multicellular organismal process IEA AHRD
BP GO:0048856 anatomical structure development IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0000226 microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000911 cytokinesis by cell plate formation IEP Predict GO terms from Neighborhoods
CC GO:0000922 spindle pole IEP Predict GO terms from Neighborhoods
MF GO:0001653 peptide receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0001732 formation of cytoplasmic translation initiation complex IEP Predict GO terms from Neighborhoods
BP GO:0002183 cytoplasmic translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0002188 translation reinitiation IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
BP GO:0003013 circulatory system process IEP Predict GO terms from Neighborhoods
BP GO:0003018 vascular process in circulatory system IEP Predict GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Predict GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Predict GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Predict GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Predict GO terms from Neighborhoods
MF GO:0003785 actin monomer binding IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005102 signaling receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predict GO terms from Neighborhoods
CC GO:0005874 microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005880 nuclear microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006935 chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007164 establishment of tissue polarity IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Predict GO terms from Neighborhoods
MF GO:0008569 minus-end-directed microtubule motor activity IEP Predict GO terms from Neighborhoods
MF GO:0008574 plus-end-directed microtubule motor activity IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009606 tropism IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009629 response to gravity IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009658 chloroplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009838 abscission IEP Predict GO terms from Neighborhoods
MF GO:0009881 photoreceptor activity IEP Predict GO terms from Neighborhoods
MF GO:0009882 blue light photoreceptor activity IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009902 chloroplast relocation IEP Predict GO terms from Neighborhoods
BP GO:0009903 chloroplast avoidance movement IEP Predict GO terms from Neighborhoods
BP GO:0009908 flower development IEP Predict GO terms from Neighborhoods
BP GO:0009932 cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0009934 regulation of meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009958 positive gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
BP GO:0010015 root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010048 vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010075 regulation of meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010080 regulation of floral meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010088 phloem development IEP Predict GO terms from Neighborhoods
BP GO:0010101 post-embryonic root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010102 lateral root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010118 stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:0010183 pollen tube guidance IEP Predict GO terms from Neighborhoods
BP GO:0010227 floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0010232 vascular transport IEP Predict GO terms from Neighborhoods
BP GO:0010233 phloem transport IEP Predict GO terms from Neighborhoods
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0010342 endosperm cellularization IEP Predict GO terms from Neighborhoods
BP GO:0010360 negative regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0010361 regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0010555 response to mannitol IEP Predict GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016282 eukaryotic 43S preinitiation complex IEP Predict GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0016324 apical plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017046 peptide hormone binding IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0030865 cortical cytoskeleton organization IEP Predict GO terms from Neighborhoods
MF GO:0030971 receptor tyrosine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0031109 microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031122 cytoplasmic microtubule organization IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0031341 regulation of cell killing IEP Predict GO terms from Neighborhoods
CC GO:0031519 PcG protein complex IEP Predict GO terms from Neighborhoods
BP GO:0031534 minus-end directed microtubule sliding IEP Predict GO terms from Neighborhoods
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032878 regulation of establishment or maintenance of cell polarity IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
CC GO:0033290 eukaryotic 48S preinitiation complex IEP Predict GO terms from Neighborhoods
MF GO:0033612 receptor serine/threonine kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Predict GO terms from Neighborhoods
MF GO:0038023 signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0040011 locomotion IEP Predict GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Predict GO terms from Neighborhoods
BP GO:0042330 taxis IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042996 regulation of Golgi to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0042998 positive regulation of Golgi to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
CC GO:0043614 multi-eIF complex IEP Predict GO terms from Neighborhoods
MF GO:0043621 protein self-association IEP Predict GO terms from Neighborhoods
BP GO:0043622 cortical microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0044001 migration in host IEP Predict GO terms from Neighborhoods
BP GO:0044111 formation of structure involved in a symbiotic process IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0045478 fusome organization IEP Predict GO terms from Neighborhoods
BP GO:0045490 pectin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045724 positive regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046602 regulation of mitotic centrosome separation IEP Predict GO terms from Neighborhoods
BP GO:0046739 transport of virus in multicellular host IEP Predict GO terms from Neighborhoods
BP GO:0046740 transport of virus in host, cell to cell IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046785 microtubule polymerization IEP Predict GO terms from Neighborhoods
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048507 meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048638 regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0050829 defense response to Gram-negative bacterium IEP Predict GO terms from Neighborhoods
BP GO:0050918 positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051012 microtubule sliding IEP Predict GO terms from Neighborhoods
BP GO:0051051 negative regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051255 spindle midzone assembly IEP Predict GO terms from Neighborhoods
BP GO:0051256 mitotic spindle midzone assembly IEP Predict GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051656 establishment of organelle localization IEP Predict GO terms from Neighborhoods
BP GO:0051667 establishment of plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051709 regulation of killing of cells of another organism IEP Predict GO terms from Neighborhoods
BP GO:0051839 regulation by host of cytolysis of symbiont cells IEP Predict GO terms from Neighborhoods
BP GO:0051841 positive regulation by host of cytolysis of symbiont cells IEP Predict GO terms from Neighborhoods
BP GO:0052093 formation of specialized structure for nutrient acquisition IEP Predict GO terms from Neighborhoods
BP GO:0052096 formation of syncytium involving giant cell for nutrient acquisition IEP Predict GO terms from Neighborhoods
BP GO:0055073 cadmium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055076 transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055078 sodium ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0060089 molecular transducer activity IEP Predict GO terms from Neighborhoods
BP GO:0060866 leaf abscission IEP Predict GO terms from Neighborhoods
BP GO:0061085 regulation of histone H3-K27 methylation IEP Predict GO terms from Neighborhoods
BP GO:0061087 positive regulation of histone H3-K27 methylation IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
BP GO:0062075 pollen aperture formation IEP Predict GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
MF GO:0070273 phosphatidylinositol-4-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0070373 negative regulation of ERK1 and ERK2 cascade IEP Predict GO terms from Neighborhoods
CC GO:0071540 eukaryotic translation initiation factor 3 complex, eIF3e IEP Predict GO terms from Neighborhoods
CC GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072507 divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0090406 pollen tube IEP Predict GO terms from Neighborhoods
BP GO:0090548 response to nitrate starvation IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
CC GO:0090619 meiotic spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090698 post-embryonic plant morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
CC GO:0097431 mitotic spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
CC GO:0098590 plasma membrane region IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
CC GO:0099081 supramolecular polymer IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
CC GO:0099512 supramolecular fiber IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0120025 plasma membrane bounded cell projection IEP Predict GO terms from Neighborhoods
BP GO:0120034 positive regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902017 regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902855 regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902857 positive regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1904550 response to arachidonic acid IEP Predict GO terms from Neighborhoods
BP GO:1905392 plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
CC GO:1990023 mitotic spindle midzone IEP Predict GO terms from Neighborhoods
MF GO:1990782 protein tyrosine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:2000023 regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2000114 regulation of establishment of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
BP GO:2000603 regulation of secondary growth IEP Predict GO terms from Neighborhoods
BP GO:2000605 positive regulation of secondary growth IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008004 OCTOPUS-like 10 137
IPR008004 OCTOPUS-like 141 612
No external refs found!