SOLTUB.AGRIA.G00000023569

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Gene families : OG_02_0020245 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023569
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	AHRD
MF	GO:0008171	O-methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016740	transferase activity	IEA	AHRD
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0017096	acetylserotonin O-methyltransferase activity	IEA	AHRD
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0030186	melatonin metabolic process	None	Extended
BP	GO:0030187	melatonin biosynthetic process	IEA	AHRD
BP	GO:0032259	methylation	IEA	AHRD
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034754	cellular hormone metabolic process	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0042435	indole-containing compound biosynthetic process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0000455	enzyme-directed rRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001522	pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001539	cilium or flagellum-dependent cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:0001701	in utero embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0003341	cilium movement	IEP	Predict GO terms from Neighborhoods
MF	GO:0004477	methenyltetrahydrofolate cyclohydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004566	beta-glucuronidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006376	mRNA splice site selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006730	one-carbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006857	oligopeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007267	cell-cell signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0007268	chemical synaptic transmission	IEP	Predict GO terms from Neighborhoods
MF	GO:0008170	N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008276	protein methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008988	rRNA (adenine-N6-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009853	photorespiration	IEP	Predict GO terms from Neighborhoods
MF	GO:0009982	pseudouridine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016433	rRNA (adenine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predict GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017069	snRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019238	cyclohydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030317	flagellated sperm motility	IEP	Predict GO terms from Neighborhoods
BP	GO:0030575	nuclear body organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031118	rRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031644	regulation of nervous system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033119	negative regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0033120	positive regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034635	glutathione transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035999	tetrahydrofolate interconversion	IEP	Predict GO terms from Neighborhoods
MF	GO:0036002	pre-mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042054	histone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042060	wound healing	IEP	Predict GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042939	tripeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043094	cellular metabolic compound salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044030	regulation of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048025	negative regulation of mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0048026	positive regulation of mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0048863	stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050685	positive regulation of mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0050686	negative regulation of mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0050805	negative regulation of synaptic transmission	IEP	Predict GO terms from Neighborhoods
MF	GO:0052748	baicalin beta-D-glucuronidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060285	cilium-dependent cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:0060294	cilium movement involved in cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0071625	vocalization behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0072337	modified amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0080113	regulation of seed growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0080151	positive regulation of salicylic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090394	negative regulation of excitatory postsynaptic potential	IEP	Predict GO terms from Neighborhoods
MF	GO:0097322	7SK snRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0097722	sperm motility	IEP	Predict GO terms from Neighborhoods
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098732	macromolecule deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098734	macromolecule depalmitoylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098781	ncRNA transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:0098794	postsynapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0098815	modulation of excitatory postsynaptic potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0098916	anterograde trans-synaptic signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0099153	synaptic transmission, serotonergic	IEP	Predict GO terms from Neighborhoods
BP	GO:0099536	synaptic signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0099537	trans-synaptic signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1902866	regulation of retina development in camera-type eye	IEP	Predict GO terms from Neighborhoods
BP	GO:1903312	negative regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1904047	S-adenosyl-L-methionine binding	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR029063	SAM-dependent_MTases_sf	41	260
IPR007213	Ppm1/Ppm2/Tcmp	75	182

External Links

No external refs found!

SOLTUB.AGRIA.G00000023569

Expression Profile

Co-expression Networks

Functional Annotation