SOLTUB.AGRIA.G00000024076

Description : Protein kinase superfamily protein

Gene families : OG_02_0000592 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024076
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_157

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
CC	GO:0000228	nuclear chromosome	IEA	AHRD
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	None	Extended
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEA	AHRD
BP	GO:0000398	mRNA splicing, via spliceosome	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	None	Extended
CC	GO:0002944	cyclin K-CDK12 complex	IEA	AHRD
CC	GO:0002945	cyclin K-CDK13 complex	IEA	AHRD
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IEA	AHRD
CC	GO:0005694	chromosome	None	Extended
CC	GO:0005703	polytene chromosome puff	IEA	AHRD
CC	GO:0005794	Golgi apparatus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	IEA	AHRD
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
CC	GO:0016604	nuclear body	None	Extended
CC	GO:0016607	nuclear speck	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	AHRD
CC	GO:0019908	nuclear cyclin-dependent protein kinase holoenzyme complex	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0030097	hemopoiesis	IEA	AHRD
MF	GO:0030332	cyclin binding	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032784	regulation of DNA-templated transcription elongation	None	Extended
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	None	Extended
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043405	regulation of MAP kinase activity	IEA	AHRD
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043484	regulation of RNA splicing	IEA	AHRD
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045596	negative regulation of cell differentiation	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	IEA	AHRD
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048440	carpel development	IEA	AHRD
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048534	hematopoietic or lymphoid organ development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050792	regulation of viral process	IEA	AHRD
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097472	cyclin-dependent protein kinase activity	None	Extended
CC	GO:0098687	chromosomal region	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1900424	regulation of defense response to bacterium	None	Extended
BP	GO:1900426	positive regulation of defense response to bacterium	IEA	AHRD
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902288	regulation of defense response to oomycetes	None	Extended
BP	GO:1902290	positive regulation of defense response to oomycetes	IEA	AHRD
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000031	regulation of salicylic acid mediated signaling pathway	IEA	AHRD
BP	GO:2000736	regulation of stem cell differentiation	None	Extended
BP	GO:2000737	negative regulation of stem cell differentiation	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
MF	GO:0005216	ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005253	anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006820	anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009270	response to humidity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010037	response to carbon dioxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0010119	regulation of stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010193	response to ozone	IEP	Predict GO terms from Neighborhoods
BP	GO:0010359	regulation of anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015267	channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0019902	phosphatase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019903	protein phosphatase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032409	regulation of transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032411	positive regulation of transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032412	regulation of ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032414	positive regulation of ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034762	regulation of transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034764	positive regulation of transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034765	regulation of ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034767	positive regulation of ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043269	regulation of ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043270	positive regulation of ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0044070	regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0048871	multicellular organismal homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050878	regulation of body fluid levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0050891	multicellular organismal water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051050	positive regulation of transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090333	regulation of stomatal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:1901529	positive regulation of anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902456	regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1903793	positive regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903959	regulation of anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903961	positive regulation of anion transmembrane transport	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	88	373
IPR011009	Kinase-like_dom_sf	82	378

External Links

No external refs found!

SOLTUB.AGRIA.G00000024076

Expression Profile

Co-expression Networks

Functional Annotation