SOLTUB.AGRIA.G00000024079

Description : 10 kDa chaperonin

Gene families : OG_02_0002550 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024079
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IEA	AHRD
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	AHRD
BP	GO:0006457	protein folding	None	Extended
BP	GO:0006458	'de novo' protein folding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006986	response to unfolded protein	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0030150	protein import into mitochondrial matrix	IEA	AHRD
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044743	protein transmembrane import into intracellular organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051082	unfolded protein binding	IEA	AHRD
BP	GO:0051084	'de novo' post-translational protein folding	None	Extended
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEA	AHRD
MF	GO:0051087	chaperone binding	IEA	AHRD
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0061077	chaperone-mediated protein folding	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1990542	mitochondrial transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000027	ribosomal large subunit assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0000154	rRNA modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0000215	tRNA 2'-phosphotransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000387	spliceosomal snRNP assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000395	mRNA 5'-splice site recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0000469	cleavage involved in rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000470	maturation of LSU-rRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0000491	small nucleolar ribonucleoprotein complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0000493	box H/ACA snoRNP assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0000723	telomere maintenance	IEP	Predict GO terms from Neighborhoods
CC	GO:0000786	nucleosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0001522	pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001824	blastocyst development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001889	liver development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002181	cytoplasmic translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0003002	regionalization	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005654	nucleoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005682	U5 snRNP	IEP	Predict GO terms from Neighborhoods
CC	GO:0005683	U7 snRNP	IEP	Predict GO terms from Neighborhoods
CC	GO:0005685	U1 snRNP	IEP	Predict GO terms from Neighborhoods
CC	GO:0005686	U2 snRNP	IEP	Predict GO terms from Neighborhoods
CC	GO:0005687	U4 snRNP	IEP	Predict GO terms from Neighborhoods
CC	GO:0005689	U12-type spliceosomal complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005697	telomerase holoenzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005730	nucleolus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006278	RNA-templated DNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006376	mRNA splice site selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007004	telomere maintenance via telomerase	IEP	Predict GO terms from Neighborhoods
BP	GO:0007411	axon guidance	IEP	Predict GO terms from Neighborhoods
MF	GO:0008097	5S rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008187	poly-pyrimidine tract binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008266	poly(U) RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009292	horizontal gene transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0009294	DNA-mediated transformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009757	hexose mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009909	regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009910	negative regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009934	regulation of meristem structural organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009955	adaxial/abaxial pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009965	leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010083	regulation of vegetative meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010151	chloroplast elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010187	negative regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010255	glucose mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010458	exit from mitosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010833	telomere maintenance via telomere lengthening	IEP	Predict GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021545	cranial nerve development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021554	optic nerve development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021675	nerve development	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
MF	GO:0030515	snoRNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030687	preribosome, large subunit precursor	IEP	Predict GO terms from Neighborhoods
BP	GO:0031100	animal organ regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0031118	rRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031120	snRNA pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031175	neuron projection development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031290	retinal ganglion cell axon guidance	IEP	Predict GO terms from Neighborhoods
CC	GO:0031429	box H/ACA snoRNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032104	regulation of response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0032107	regulation of response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032200	telomere organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0034513	box H/ACA snoRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034709	methylosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0034719	SMN-Sm protein complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040031	snRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0042285	xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042788	polysomal ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043186	P granule	IEP	Predict GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0043603	cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043610	regulation of carbohydrate utilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0044237	cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0044772	mitotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
CC	GO:0044815	DNA packaging complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0047209	coniferyl-alcohol glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048438	floral whorl development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048439	flower morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048467	gynoecium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048831	regulation of shoot system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050403	trans-zeatin O-beta-D-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050404	zeatin O-beta-D-xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050502	cis-zeatin O-beta-D-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060041	retina development in camera-type eye	IEP	Predict GO terms from Neighborhoods
BP	GO:0060348	bone development	IEP	Predict GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0071004	U2-type prespliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071005	U2-type precatalytic spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071007	U2-type catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071010	prespliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071011	precatalytic spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071013	catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071014	post-mRNA release spliceosomal complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071897	DNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0072588	box H/ACA RNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097327	response to antineoplastic agent	IEP	Predict GO terms from Neighborhoods
BP	GO:0097421	liver regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0097485	neuron projection guidance	IEP	Predict GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0120115	Lsm2-8 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902326	positive regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903321	negative regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1905177	tracheary element differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1905613	regulation of developmental vegetative growth	IEP	Predict GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR020818	Chaperonin_GroES	5	94
IPR011032	GroES-like_sf	4	95

External Links

No external refs found!

SOLTUB.AGRIA.G00000024079

Expression Profile

Co-expression Networks

Functional Annotation