Description : ATP-binding cassette sub-family C member 11
Gene families : OG_02_0005347 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002532 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_221 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000244 | spliceosomal tri-snRNP complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000387 | spliceosomal snRNP assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001893 | maternal placenta development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003896 | DNA primase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005652 | nuclear lamina | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005844 | polysome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007044 | cell-substrate junction assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007319 | negative regulation of oskar mRNA translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007369 | gastrulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007548 | sex differentiation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010001 | glial cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010048 | vernalization response | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010181 | FMN binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010369 | chromocenter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010634 | positive regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015030 | Cajal body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016363 | nuclear matrix | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016574 | histone ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017145 | stem cell division | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030276 | clathrin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030371 | translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030488 | tRNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031053 | primary miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031581 | hemidesmosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031590 | wybutosine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031591 | wybutosine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033119 | negative regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033120 | positive regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034046 | poly(G) binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034329 | cell junction assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035198 | miRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035613 | RNA stem-loop binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036002 | pre-mRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042078 | germ-line stem cell division | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043073 | germ cell nucleus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043139 | 5'-3' DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043186 | P granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043578 | nuclear matrix organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044030 | regulation of DNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045292 | mRNA cis splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045309 | protein phosphorylated amino acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045828 | positive regulation of isoprenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046011 | regulation of oskar mRNA translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048025 | negative regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048026 | positive regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048027 | mRNA 5'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048598 | embryonic morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048864 | stem cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050684 | regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050685 | positive regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050686 | negative regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050815 | phosphoserine residue binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050931 | pigment cell differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051219 | phosphoprotein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051261 | protein depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060135 | maternal process involved in female pregnancy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060216 | definitive hemopoiesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061980 | regulatory RNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070062 | extracellular exosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070063 | RNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070717 | poly-purine tract binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071005 | U2-type precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071006 | U2-type catalytic step 1 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071007 | U2-type catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071012 | catalytic step 1 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072318 | clathrin coat disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072319 | vesicle uncoating | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072396 | response to cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072402 | response to DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072423 | response to DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072583 | clathrin-dependent endocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090615 | mitochondrial mRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097157 | pre-mRNA intronic binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097298 | regulation of nucleus size | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098787 | mRNA cleavage involved in mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098789 | pre-mRNA cleavage required for polyadenylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0099122 | RNA polymerase II C-terminal domain binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102521 | tRNA-4-demethylwyosine synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0150115 | cell-substrate junction organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901259 | chloroplast rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901403 | positive regulation of tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901465 | positive regulation of tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902275 | regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902326 | positive regulation of chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903684 | regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903688 | positive regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904143 | positive regulation of carotenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990247 | N6-methyladenosine-containing RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990269 | RNA polymerase II C-terminal domain phosphoserine binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000070 | regulation of response to water deprivation | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |