SOLTUB.AGRIA.G00000024275


Description : Dna repair protein rad51-like protein


Gene families : OG_02_0020300 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024275
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_100


Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEA AHRD
BP GO:0000708 meiotic strand invasion IEA AHRD
BP GO:0000709 meiotic joint molecule formation IEA AHRD
BP GO:0000722 telomere maintenance via recombination IEA AHRD
BP GO:0000730 DNA recombinase assembly IEA AHRD
CC GO:0000775 chromosome, centromeric region IEA AHRD
CC GO:0000781 chromosome, telomeric region IEA AHRD
CC GO:0000785 chromatin IEA AHRD
CC GO:0000800 lateral element IEA AHRD
BP GO:0001932 regulation of protein phosphorylation IEA AHRD
BP GO:0002769 natural killer cell inhibitory signaling pathway IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003690 double-stranded DNA binding IEA AHRD
MF GO:0003697 single-stranded DNA binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005759 mitochondrial matrix IEA AHRD
CC GO:0005815 microtubule organizing center IEA AHRD
BP GO:0006268 DNA unwinding involved in DNA replication IEA AHRD
BP GO:0006289 nucleotide-excision repair IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0007130 synaptonemal complex assembly IEA AHRD
BP GO:0007143 female meiotic nuclear division IEA AHRD
BP GO:0007294 germarium-derived oocyte fate determination IEA AHRD
BP GO:0007533 mating type switching IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
BP GO:0008298 intracellular mRNA localization IEA AHRD
BP GO:0009636 response to toxic substance IEA AHRD
CC GO:0009897 external side of plasma membrane IEA AHRD
BP GO:0009949 polarity specification of anterior/posterior axis IEA AHRD
BP GO:0009951 polarity specification of dorsal/ventral axis IEA AHRD
BP GO:0010165 response to X-ray IEA AHRD
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEA AHRD
BP GO:0010833 telomere maintenance via telomere lengthening IEA AHRD
CC GO:0016605 PML body IEA AHRD
MF GO:0017116 single-stranded DNA helicase activity IEA AHRD
MF GO:0019903 protein phosphatase binding IEA AHRD
BP GO:0030491 heteroduplex formation IEA AHRD
BP GO:0030717 oocyte karyosome formation IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
CC GO:0035861 site of double-strand break IEA AHRD
BP GO:0036297 interstrand cross-link repair IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043504 mitochondrial DNA repair IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
BP GO:0051106 positive regulation of DNA ligation IEA AHRD
BP GO:0051260 protein homooligomerization IEA AHRD
MF GO:0070182 DNA polymerase binding IEA AHRD
BP GO:0071480 cellular response to gamma radiation IEA AHRD
BP GO:0072711 cellular response to hydroxyurea IEA AHRD
BP GO:0072719 cellular response to cisplatin IEA AHRD
BP GO:0072757 cellular response to camptothecin IEA AHRD
BP GO:0110027 negative regulation of DNA strand resection involved in replication fork processing IEA AHRD
BP GO:0120290 stalled replication fork localization to nuclear periphery IEA AHRD
BP GO:1904631 response to glucoside IEA AHRD
MF GO:1905334 Swi5-Sfr1 complex binding IEA AHRD
BP GO:1990414 replication-born double-strand break repair via sister chromatid exchange IEA AHRD
BP GO:1990426 mitotic recombination-dependent replication fork processing IEA AHRD
BP GO:1990918 double-strand break repair involved in meiotic recombination IEA AHRD
BP GO:2000272 negative regulation of signaling receptor activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0000792 heterochromatin IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000796 condensin complex IEP Predict GO terms from Neighborhoods
BP GO:0001824 blastocyst development IEP Predict GO terms from Neighborhoods
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0004797 thymidine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP Predict GO terms from Neighborhoods
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007076 mitotic chromosome condensation IEP Predict GO terms from Neighborhoods
MF GO:0008199 ferric iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009120 deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010032 meiotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0010225 response to UV-C IEP Predict GO terms from Neighborhoods
BP GO:0016321 female meiosis chromosome segregation IEP Predict GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predict GO terms from Neighborhoods
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019136 deoxynucleoside kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0031288 sorocarp morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0033553 rDNA heterochromatin IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044815 DNA packaging complex IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0046104 thymidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046125 pyrimidine deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051262 protein tetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051289 protein homotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051290 protein heterotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051291 protein heterooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051304 chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:0051307 meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:0051309 female meiosis chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0061638 CENP-A containing chromatin IEP Predict GO terms from Neighborhoods
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0071897 DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 77 329
IPR027417 P-loop_NTPase 94 330
IPR011941 DNA_recomb/repair_Rad51 29 332
IPR010995 DNA_repair_Rad51/TF_NusA_a-hlx 22 75
No external refs found!