SOLTUB.AGRIA.G00000024494

Description : Calmodulin-binding transcription activator 3

Gene families : OG_02_0004620 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024494
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_70

hydrolase activity, acting on glycosyl bonds

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0003712	transcription coregulator activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005694	chromosome	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007062	sister chromatid cohesion	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008608	attachment of spindle microtubules to kinetochore	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010044	response to aluminum ion	None	Extended
BP	GO:0010150	leaf senescence	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0014074	response to purine-containing compound	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033198	response to ATP	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046683	response to organophosphorus	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050826	response to freezing	IEA	AHRD
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051177	meiotic sister chromatid cohesion	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051316	attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation	None	Extended
BP	GO:0051455	monopolar spindle attachment to meiosis I kinetochore	IEA	AHRD
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051754	meiotic sister chromatid cohesion, centromeric	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	None	Extended
BP	GO:0070417	cellular response to cold	IEA	AHRD
BP	GO:0070601	centromeric sister chromatid cohesion	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071275	cellular response to aluminum ion	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071318	cellular response to ATP	None	Extended
BP	GO:0071407	cellular response to organic cyclic compound	None	Extended
BP	GO:0071417	cellular response to organonitrogen compound	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090693	plant organ senescence	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0106167	extracellular ATP signaling	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900367	positive regulation of defense response to insect	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000068	regulation of defense response to insect	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004024	alcohol dehydrogenase activity, zinc-dependent	IEP	Predict GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007059	chromosome segregation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009413	response to flooding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009743	response to carbohydrate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009744	response to sucrose	IEP	Predict GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031000	response to caffeine	IEP	Predict GO terms from Neighborhoods
BP	GO:0032355	response to estradiol	IEP	Predict GO terms from Neighborhoods
BP	GO:0034285	response to disaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0042542	response to hydrogen peroxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043279	response to alkaloid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045132	meiotic chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046185	aldehyde catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046292	formaldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046294	formaldehyde catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048481	plant ovule development	IEP	Predict GO terms from Neighborhoods
MF	GO:0051903	S-(hydroxymethyl)glutathione dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:0098813	nuclear chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0110095	cellular detoxification of aldehyde	IEP	Predict GO terms from Neighborhoods
BP	GO:1900037	regulation of cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:1900039	positive regulation of cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005559	CG-1_dom	480	522

External Links

No external refs found!

SOLTUB.AGRIA.G00000024494

Expression Profile

Co-expression Networks

Functional Annotation