SOLTUB.AGRIA.G00000024559

Description : Rer1 protein, putative

Gene families : OG_02_0020313 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024559
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_506

Type	GO Term	Name	Evidence	Source
CC	GO:0000322	storage vacuole	None	Extended
CC	GO:0000323	lytic vacuole	None	Extended
CC	GO:0000324	fungal-type vacuole	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	IEA	AHRD
CC	GO:0005798	Golgi-associated vesicle	None	Extended
CC	GO:0005801	cis-Golgi network	IEA	AHRD
BP	GO:0006621	protein retention in ER lumen	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009986	cell surface	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030134	COPII-coated ER to Golgi transport vesicle	IEA	AHRD
CC	GO:0030135	coated vesicle	None	Extended
CC	GO:0030137	COPI-coated vesicle	IEA	AHRD
CC	GO:0030173	integral component of Golgi membrane	IEA	AHRD
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031228	intrinsic component of Golgi membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
CC	GO:0031301	integral component of organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032507	maintenance of protein location in cell	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0033130	acetylcholine receptor binding	IEA	AHRD
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
BP	GO:0043113	receptor clustering	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071340	skeletal muscle acetylcholine-gated channel clustering	IEA	AHRD
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903076	regulation of protein localization to plasma membrane	None	Extended
BP	GO:1903078	positive regulation of protein localization to plasma membrane	IEA	AHRD
BP	GO:1903829	positive regulation of protein localization	None	Extended
BP	GO:1904375	regulation of protein localization to cell periphery	None	Extended
BP	GO:1904377	positive regulation of protein localization to cell periphery	None	Extended
BP	GO:1905475	regulation of protein localization to membrane	None	Extended
BP	GO:1905477	positive regulation of protein localization to membrane	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005840	ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0045324	late endosome to vacuole transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071985	multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004932	Rer1	19	177

External Links

No external refs found!

SOLTUB.AGRIA.G00000024559

Expression Profile

Co-expression Networks

Functional Annotation