SOLTUB.AGRIA.G00000002577


Description : Transposon MuDR mudrA-like protein, putative


Gene families : OG_02_0032027 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002577
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_111


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0001824 blastocyst development IEP Predict GO terms from Neighborhoods
MF GO:0004124 cysteine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006535 cysteine biosynthetic process from serine IEP Predict GO terms from Neighborhoods
BP GO:0006563 L-serine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006995 cellular response to nitrogen starvation IEP Predict GO terms from Neighborhoods
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009553 embryo sac development IEP Predict GO terms from Neighborhoods
BP GO:0009566 fertilization IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009757 hexose mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009836 fruit ripening, climacteric IEP Predict GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0010255 glucose mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Predict GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019499 cyanide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0031983 vesicle lumen IEP Predict GO terms from Neighborhoods
CC GO:0034774 secretory granule lumen IEP Predict GO terms from Neighborhoods
MF GO:0036402 proteasome-activating activity IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
BP GO:0043562 cellular response to nitrogen levels IEP Predict GO terms from Neighborhoods
BP GO:0043921 modulation by host of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0043922 negative regulation by host of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0044788 modulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044793 negative regulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0045898 regulation of RNA polymerase II transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0045899 positive regulation of RNA polymerase II transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0050017 L-3-cyanoalanine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0051851 modulation by host of symbiont process IEP Predict GO terms from Neighborhoods
CC GO:0060205 cytoplasmic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0060260 regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0070682 proteasome regulatory particle assembly IEP Predict GO terms from Neighborhoods
BP GO:0080147 root hair cell development IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000142 regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!