SOLTUB.AGRIA.G00000024708


Description : PCI domain-containing 2


Gene families : OG_02_0009793 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024708
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_270


Type GO Term Name Evidence Source
BP GO:0000973 post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA AHRD
MF GO:0003690 double-stranded DNA binding IEA AHRD
MF GO:0003723 RNA binding IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0005844 polysome IEA AHRD
BP GO:0006368 transcription elongation by RNA polymerase II promoter IEA AHRD
BP GO:0009873 ethylene-activated signaling pathway IEA AHRD
BP GO:0016973 poly(A)+ mRNA export from nucleus IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
BP GO:0043066 negative regulation of apoptotic process IEA AHRD
BP GO:0043488 regulation of mRNA stability IEA AHRD
CC GO:0044615 nuclear pore nuclear basket IEA AHRD
BP GO:0045579 positive regulation of B cell differentiation IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0048364 root development IEA AHRD
BP GO:0048536 spleen development IEA AHRD
BP GO:0060968 obsolete regulation of gene silencing IEA AHRD
CC GO:0070390 transcription export complex 2 IEA AHRD
BP GO:0090267 positive regulation of mitotic cell cycle spindle assembly checkpoint IEA AHRD
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0001701 in utero embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
BP GO:0002327 immature B cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002521 leukocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004661 protein geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004663 Rab geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005968 Rab-protein geranylgeranyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0007626 locomotory behavior IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0010493 Lewis a epitope biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Predict GO terms from Neighborhoods
BP GO:0018344 protein geranylgeranylation IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030098 lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030183 B cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Predict GO terms from Neighborhoods
CC GO:0030688 preribosome, small subunit precursor IEP Predict GO terms from Neighborhoods
BP GO:0030970 retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
CC GO:0031252 cell leading edge IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0032239 regulation of nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0032241 positive regulation of nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032410 negative regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Predict GO terms from Neighborhoods
BP GO:0032527 protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0033334 fin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0033962 P-body assembly IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034063 stress granule assembly IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034515 proteasome storage granule IEP Predict GO terms from Neighborhoods
BP GO:0034763 negative regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034766 negative regulation of ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035107 appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035113 embryonic appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035118 embryonic pectoral fin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035138 pectoral fin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035239 tube morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035640 exploration behavior IEP Predict GO terms from Neighborhoods
BP GO:0035641 locomotory exploration behavior IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Predict GO terms from Neighborhoods
BP GO:0042113 B cell activation IEP Predict GO terms from Neighborhoods
BP GO:0042472 inner ear morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
BP GO:0043266 regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043267 negative regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043271 negative regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044322 endoplasmic reticulum quality control compartment IEP Predict GO terms from Neighborhoods
MF GO:0044325 transmembrane transporter binding IEP Predict GO terms from Neighborhoods
BP GO:0045321 leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0046649 lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046828 regulation of RNA import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0046830 positive regulation of RNA import into nucleus IEP Predict GO terms from Neighborhoods
MF GO:0046920 alpha-(1->3)-fucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048562 embryonic organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048863 stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060562 epithelial tube morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071600 otic vesicle morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Predict GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Predict GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901017 negative regulation of potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901379 regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901380 negative regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902235 regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902236 negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902606 regulation of large conductance calcium-activated potassium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1902607 negative regulation of large conductance calcium-activated potassium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1903131 mononuclear cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903513 endoplasmic reticulum to cytosol transport IEP Predict GO terms from Neighborhoods
BP GO:1903573 negative regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1904063 negative regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000197 regulation of ribonucleoprotein complex localization IEP Predict GO terms from Neighborhoods
BP GO:2000199 positive regulation of ribonucleoprotein complex localization IEP Predict GO terms from Neighborhoods
BP GO:2000200 regulation of ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:2000202 positive regulation of ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:2000206 regulation of ribosomal small subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:2000208 positive regulation of ribosomal small subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:2000232 regulation of rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2000234 positive regulation of rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2001234 negative regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001242 regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001243 negative regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001257 regulation of cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:2001258 negative regulation of cation channel activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000717 PCI_dom 287 401
No external refs found!