SOLTUB.AGRIA.G00000024744


Description : Transposon protein, putative, CACTA, En/Spm sub-class, expressed


Gene families : OG_02_0000133 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024744
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_70


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005662 DNA replication factor A complex IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0006029 proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006268 DNA unwinding involved in DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006278 RNA-templated DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006493 protein O-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0007004 telomere maintenance via telomerase IEP Predict GO terms from Neighborhoods
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010384 cell wall proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010404 cell wall hydroxyproline-rich glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010405 arabinogalactan protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010833 telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
BP GO:0018258 protein O-linked glycosylation via hydroxyproline IEP Predict GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0031428 box C/D RNP complex IEP Predict GO terms from Neighborhoods
CC GO:0031520 plasma membrane of cell tip IEP Predict GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0034620 cellular response to unfolded protein IEP Predict GO terms from Neighborhoods
CC GO:0035619 root hair tip IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
MF GO:0042162 telomeric DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0043047 single-stranded telomeric DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0044666 MLL3/4 complex IEP Predict GO terms from Neighborhoods
BP GO:0045717 negative regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045922 negative regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046910 pectinesterase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0048531 beta-1,3-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048768 root hair cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051568 histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
MF GO:0052744 phosphatidylinositol monophosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0060290 transdifferentiation IEP Predict GO terms from Neighborhoods
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0102934 costunolide synthase activity IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
MF GO:1990714 hydroxyproline O-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:2001289 lipid X metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025312 DUF4216 76 151
No external refs found!