Description : Maternal effect embryo arrest 22, putative
Gene families : OG_02_0001354 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024802 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000024809 | No alias | Maternal effect embryo arrest 22, putative | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000024809 | No alias | Maternal effect embryo arrest 22, putative | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000024809 | No alias | Maternal effect embryo arrest 22, putative | 0.03 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000349 | generation of catalytic spliceosome for first transesterification step | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000386 | second spliceosomal transesterification activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000390 | spliceosomal complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000966 | RNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002833 | positive regulation of response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003724 | RNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004016 | adenylate cyclase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005677 | chromatin silencing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007530 | sex determination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009742 | brassinosteroid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009845 | seed germination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009975 | cyclase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010048 | vernalization response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010065 | primary meristem tissue development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010068 | protoderm histogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010171 | body morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010172 | embryonic body morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010262 | somatic embryogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018992 | germ-line sex determination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019722 | calcium-mediated signaling | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019900 | kinase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019901 | protein kinase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031053 | primary miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031062 | positive regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031334 | positive regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031349 | positive regulation of defense response | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031519 | PcG protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031663 | lipopolysaccharide-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031967 | organelle envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031975 | envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032103 | positive regulation of response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032922 | circadian regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032988 | ribonucleoprotein complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033120 | positive regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035064 | methylated histone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040021 | hermaphrodite germ-line sex determination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040022 | feminization of hermaphroditic germ-line | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045088 | regulation of innate immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046777 | protein autophosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048507 | meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048508 | embryonic meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048587 | regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051569 | regulation of histone H3-K4 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051570 | regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051571 | positive regulation of histone H3-K4 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051574 | positive regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061085 | regulation of histone H3-K27 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061087 | positive regulation of histone H3-K27 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070918 | small regulatory ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071005 | U2-type precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071007 | U2-type catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071014 | post-mRNA release spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071020 | post-spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071021 | U2-type post-spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071323 | cellular response to chitin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090558 | plant epidermis development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090615 | mitochondrial mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090617 | mitochondrial mRNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140030 | modification-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140034 | methylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900109 | regulation of histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900111 | positive regulation of histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900150 | regulation of defense response to fungus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900459 | positive regulation of brassinosteroid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902456 | regulation of stomatal opening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902458 | positive regulation of stomatal opening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905393 | plant organ formation | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |