SOLTUB.AGRIA.G00000024851


Description : MADS-box transcription factor family protein


Gene families : OG_02_0015716 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024851 No neighbors in network


Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
CC GO:0000785 chromatin IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEA AHRD
BP GO:0001568 blood vessel development IEA AHRD
BP GO:0001764 neuron migration IEA AHRD
BP GO:0001782 B cell homeostasis IEA AHRD
BP GO:0001947 heart looping IEA AHRD
BP GO:0001958 endochondral ossification IEA AHRD
BP GO:0001974 blood vessel remodeling IEA AHRD
BP GO:0002062 chondrocyte differentiation IEA AHRD
BP GO:0002634 regulation of germinal center formation IEA AHRD
BP GO:0003138 primary heart field specification IEA AHRD
BP GO:0003139 secondary heart field specification IEA AHRD
BP GO:0003151 outflow tract morphogenesis IEA AHRD
BP GO:0003185 sinoatrial valve morphogenesis IEA AHRD
BP GO:0003211 cardiac ventricle formation IEA AHRD
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
CC GO:0005667 transcription regulator complex IEA AHRD
BP GO:0006959 humoral immune response IEA AHRD
BP GO:0007512 adult heart development IEA AHRD
BP GO:0007521 muscle cell fate determination IEA AHRD
BP GO:0007611 learning or memory IEA AHRD
MF GO:0008301 DNA binding, bending IEA AHRD
BP GO:0010613 positive regulation of cardiac muscle hypertrophy IEA AHRD
BP GO:0010628 positive regulation of gene expression IEA AHRD
BP GO:0010629 negative regulation of gene expression IEA AHRD
BP GO:0010694 positive regulation of alkaline phosphatase activity IEA AHRD
BP GO:0014033 neural crest cell differentiation IEA AHRD
BP GO:0014898 cardiac muscle hypertrophy in response to stress IEA AHRD
BP GO:0014902 myotube differentiation IEA AHRD
CC GO:0016607 nuclear speck IEA AHRD
BP GO:0021542 dentate gyrus development IEA AHRD
CC GO:0030017 sarcomere IEA AHRD
BP GO:0030220 platelet formation IEA AHRD
BP GO:0030224 monocyte differentiation IEA AHRD
BP GO:0030279 negative regulation of ossification IEA AHRD
BP GO:0030318 melanocyte differentiation IEA AHRD
BP GO:0030501 positive regulation of bone mineralization IEA AHRD
BP GO:0030890 positive regulation of B cell proliferation IEA AHRD
BP GO:0031285 regulation of sorocarp stalk cell differentiation IEA AHRD
BP GO:0033197 response to vitamin E IEA AHRD
MF GO:0035035 histone acetyltransferase binding IEA AHRD
BP GO:0035984 cellular response to trichostatin A IEA AHRD
BP GO:0036003 positive regulation of transcription from RNA polymerase II promoter in response to stress IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
MF GO:0042826 histone deacetylase binding IEA AHRD
BP GO:0043524 negative regulation of neuron apoptotic process IEA AHRD
BP GO:0043537 negative regulation of blood vessel endothelial cell migration IEA AHRD
BP GO:0045652 regulation of megakaryocyte differentiation IEA AHRD
BP GO:0045663 positive regulation of myoblast differentiation IEA AHRD
BP GO:0045666 positive regulation of neuron differentiation IEA AHRD
BP GO:0045669 positive regulation of osteoblast differentiation IEA AHRD
BP GO:0046326 positive regulation of glucose import IEA AHRD
MF GO:0046332 SMAD binding IEA AHRD
BP GO:0046928 regulation of neurotransmitter secretion IEA AHRD
MF GO:0046982 protein heterodimerization activity IEA AHRD
BP GO:0048167 regulation of synaptic plasticity IEA AHRD
BP GO:0048311 mitochondrion distribution IEA AHRD
BP GO:0048643 positive regulation of skeletal muscle tissue development IEA AHRD
BP GO:0048703 embryonic viscerocranium morphogenesis IEA AHRD
BP GO:0048813 dendrite morphogenesis IEA AHRD
BP GO:0050853 B cell receptor signaling pathway IEA AHRD
MF GO:0051019 mitogen-activated protein kinase binding IEA AHRD
BP GO:0051145 smooth muscle cell differentiation IEA AHRD
BP GO:0051963 regulation of synapse assembly IEA AHRD
BP GO:0051966 regulation of synaptic transmission, glutamatergic IEA AHRD
BP GO:0055005 ventricular cardiac myofibril assembly IEA AHRD
BP GO:0060021 roof of mouth development IEA AHRD
BP GO:0060025 regulation of synaptic activity IEA AHRD
BP GO:0060045 positive regulation of cardiac muscle cell proliferation IEA AHRD
BP GO:0060079 excitatory postsynaptic potential IEA AHRD
BP GO:0060290 transdifferentiation IEA AHRD
BP GO:0060297 regulation of sarcomere organization IEA AHRD
BP GO:0060536 cartilage morphogenesis IEA AHRD
BP GO:0060998 regulation of dendritic spine development IEA AHRD
BP GO:0061337 cardiac conduction IEA AHRD
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEA AHRD
BP GO:0070375 ERK5 cascade IEA AHRD
BP GO:0071222 cellular response to lipopolysaccharide IEA AHRD
BP GO:0071277 cellular response to calcium ion IEA AHRD
BP GO:0071300 cellular response to retinoic acid IEA AHRD
BP GO:0071333 cellular response to glucose stimulus IEA AHRD
BP GO:0071374 cellular response to parathyroid hormone stimulus IEA AHRD
BP GO:0071498 cellular response to fluid shear stress IEA AHRD
BP GO:0071560 cellular response to transforming growth factor beta stimulus IEA AHRD
MF GO:0071837 HMG box domain binding IEA AHRD
BP GO:0071864 positive regulation of cell proliferation in bone marrow IEA AHRD
BP GO:0072102 glomerulus morphogenesis IEA AHRD
BP GO:0072160 nephron tubule epithelial cell differentiation IEA AHRD
BP GO:1900735 positive regulation of flocculation IEA AHRD
BP GO:1901261 regulation of sorocarp spore cell differentiation IEA AHRD
BP GO:1903450 regulation of G1 to G0 transition IEA AHRD
BP GO:1904706 negative regulation of vascular associated smooth muscle cell proliferation IEA AHRD
BP GO:1904707 positive regulation of vascular associated smooth muscle cell proliferation IEA AHRD
BP GO:1904753 negative regulation of vascular associated smooth muscle cell migration IEA AHRD
BP GO:1905563 negative regulation of vascular endothelial cell proliferation IEA AHRD
BP GO:2000111 positive regulation of macrophage apoptotic process IEA AHRD
BP GO:2000310 regulation of NMDA receptor activity IEA AHRD
BP GO:2000311 regulation of AMPA receptor activity IEA AHRD
BP GO:2000727 positive regulation of cardiac muscle cell differentiation IEA AHRD
BP GO:2000987 positive regulation of behavioral fear response IEA AHRD
BP GO:2001013 epithelial cell proliferation involved in renal tubule morphogenesis IEA AHRD
BP GO:2001016 positive regulation of skeletal muscle cell differentiation IEA AHRD
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 11 50
IPR036879 TF_MADSbox_sf 1 51
No external refs found!