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  5. SOLTUB.AGRIA.G00000025266

SOLTUB.AGRIA.G00000025266


Description : ARM repeat superfamily protein


Gene families : OG_02_0009868 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025266
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_218


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0009987 cellular process IEA AHRD
CC GO:0043231 intracellular membrane-bounded organelle IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000904 cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0002679 respiratory burst involved in defense response IEP Predict GO terms from Neighborhoods
BP GO:0002831 regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0002944 cyclin K-CDK12 complex IEP Predict GO terms from Neighborhoods
CC GO:0002945 cyclin K-CDK13 complex IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004697 protein kinase C activity IEP Predict GO terms from Neighborhoods
MF GO:0004698 calcium-dependent protein kinase C activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006073 cellular glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006808 regulation of nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007231 osmosensory signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
CC GO:0008024 cyclin/CDK positive transcription elongation factor complex IEP Predict GO terms from Neighborhoods
BP GO:0008272 sulfate transport IEP Predict GO terms from Neighborhoods
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009606 tropism IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009652 thigmotropism IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009738 abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009921 auxin efflux carrier complex IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009942 longitudinal axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0009967 positive regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0009970 cellular response to sulfate starvation IEP Predict GO terms from Neighborhoods
BP GO:0010112 regulation of systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010315 auxin export across the plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010337 regulation of salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010338 leaf formation IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010647 positive regulation of cell communication IEP Predict GO terms from Neighborhoods
MF GO:0010857 calcium-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015665 alcohol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016174 NAD(P)H oxidase H2O2-forming activity IEP Predict GO terms from Neighborhoods
MF GO:0016175 superoxide-generating NAD(P)H oxidase activity IEP Predict GO terms from Neighborhoods
CC GO:0016328 lateral plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0019218 regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Predict GO terms from Neighborhoods
CC GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Predict GO terms from Neighborhoods
BP GO:0023056 positive regulation of signaling IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
MF GO:0030332 cyclin binding IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031347 regulation of defense response IEP Predict GO terms from Neighborhoods
BP GO:0031348 negative regulation of defense response IEP Predict GO terms from Neighborhoods
BP GO:0032101 regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032352 positive regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
CC GO:0032806 carboxy-terminal domain protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0033198 response to ATP IEP Predict GO terms from Neighborhoods
BP GO:0033206 meiotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
MF GO:0042937 tripeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042938 dipeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
MF GO:0042973 glucan endo-1,3-beta-D-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0043069 negative regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0043405 regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0043621 protein self-association IEP Predict GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045596 negative regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045730 respiratory burst IEP Predict GO terms from Neighborhoods
BP GO:0045940 positive regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048440 carpel development IEP Predict GO terms from Neighborhoods
BP GO:0048444 floral organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048581 negative regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048584 positive regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048598 embryonic morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048731 system development IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048830 adventitious root development IEP Predict GO terms from Neighborhoods
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0050810 regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0051019 mitogen-activated protein kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0051093 negative regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0060026 convergent extension IEP Predict GO terms from Neighborhoods
BP GO:0060027 convergent extension involved in gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0060560 developmental growth involved in morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0061578 Lys63-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0062197 cellular response to chemical stress IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
CC GO:0070691 P-TEFb complex IEP Predict GO terms from Neighborhoods
CC GO:0070692 CTDK-1 complex IEP Predict GO terms from Neighborhoods
CC GO:0070693 P-TEFb-cap methyltransferase complex IEP Predict GO terms from Neighborhoods
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0070816 phosphorylation of RNA polymerase II C-terminal domain IEP Predict GO terms from Neighborhoods
BP GO:0071219 cellular response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0071470 cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
MF GO:0071916 dipeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0080161 auxin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080162 endoplasmic reticulum to cytosol auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0080168 abscisic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090378 seed trichome elongation IEP Predict GO terms from Neighborhoods
MF GO:0090440 abscisic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0090698 post-embryonic plant morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0097472 cyclin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
BP GO:1900032 regulation of trichome patterning IEP Predict GO terms from Neighborhoods
BP GO:1900033 negative regulation of trichome patterning IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900426 positive regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902288 regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902290 positive regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902446 regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902448 positive regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1903409 reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1905614 negative regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:1905622 negative regulation of leaf development IEP Predict GO terms from Neighborhoods
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000273 positive regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2000737 negative regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006911 ARM-rpt_dom 199 390
IPR016024 ARM-type_fold 309 542
IPR016024 ARM-type_fold 167 376
No external refs found!