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  5. SOLTUB.AGRIA.G00000002657

SOLTUB.AGRIA.G00000002657


Description : cotton fiber protein


Gene families : OG_02_0001740 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002657
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_91

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000002655 No alias cotton fiber protein 0.02 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predict GO terms from Neighborhoods
BP GO:0002791 regulation of peptide secretion IEP Predict GO terms from Neighborhoods
BP GO:0002793 positive regulation of peptide secretion IEP Predict GO terms from Neighborhoods
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004623 phospholipase A2 activity IEP Predict GO terms from Neighborhoods
MF GO:0005372 water transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005731 nucleolus organizer region IEP Predict GO terms from Neighborhoods
BP GO:0007143 female meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0010083 regulation of vegetative meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010190 cytochrome b6f complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010501 RNA secondary structure unwinding IEP Predict GO terms from Neighborhoods
BP GO:0010586 miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015645 fatty acid ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0015909 long-chain fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
CC GO:0016442 RISC complex IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0019432 triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0030874 nucleolar chromatin IEP Predict GO terms from Neighborhoods
BP GO:0031054 pre-miRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
BP GO:0032024 positive regulation of insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0033169 histone H3-K9 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0034377 plasma lipoprotein particle assembly IEP Predict GO terms from Neighborhoods
BP GO:0034379 very-low-density lipoprotein particle assembly IEP Predict GO terms from Neighborhoods
BP GO:0035019 somatic stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
MF GO:0035197 siRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0035336 long-chain fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035338 long-chain fatty-acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035384 thioester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042178 xenobiotic catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044539 long-chain fatty acid import into cell IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046460 neutral lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046463 acylglycerol biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0046887 positive regulation of hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047498 calcium-dependent phospholipase A2 activity IEP Predict GO terms from Neighborhoods
MF GO:0047676 arachidonate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0047893 flavonol 3-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048439 flower morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0050275 scopoletin glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050404 zeatin O-beta-D-xylosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050714 positive regulation of protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0050796 regulation of insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051553 flavone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051554 flavonol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051555 flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0055046 microgametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060996 dendritic spine development IEP Predict GO terms from Neighborhoods
BP GO:0061866 obsolete negative regulation of histone H3-S10 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0065005 protein-lipid complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
CC GO:0070578 RISC-loading complex IEP Predict GO terms from Neighborhoods
BP GO:0070672 response to interleukin-15 IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071616 acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071825 protein-lipid complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0071827 plasma lipoprotein particle organization IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0090276 regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0090277 positive regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
MF GO:0090432 myristoyl-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0090433 palmitoyl-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0090434 oleoyl-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0140354 lipid import into cell IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1901222 regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901224 positive regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1902117 positive regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1903341 regulation of meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:1903343 positive regulation of meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:1903533 regulation of protein targeting IEP Predict GO terms from Neighborhoods
BP GO:1903551 regulation of extracellular exosome assembly IEP Predict GO terms from Neighborhoods
BP GO:1903553 positive regulation of extracellular exosome assembly IEP Predict GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:2000615 regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000616 negative regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008480 DUF761_pln 149 183
No external refs found!