SOLTUB.AGRIA.G00000025736

Description : Chaperone protein dnaJ

Gene families : OG_02_0015843 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025736
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_152

Type	GO Term	Name	Evidence	Source
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0000740	nuclear membrane fusion	IEA	AHRD
BP	GO:0000741	karyogamy	None	Extended
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001933	negative regulation of protein phosphorylation	None	Extended
BP	GO:0001959	regulation of cytokine-mediated signaling pathway	None	Extended
BP	GO:0001960	negative regulation of cytokine-mediated signaling pathway	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002683	negative regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002832	negative regulation of response to biotic stimulus	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005113	patched binding	IEA	AHRD
MF	GO:0005126	cytokine receptor binding	None	Extended
MF	GO:0005133	interferon-gamma receptor binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005884	actin filament	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006457	protein folding	None	Extended
BP	GO:0006458	'de novo' protein folding	None	Extended
BP	GO:0006469	negative regulation of protein kinase activity	IEA	AHRD
BP	GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0007349	cellularization	None	Extended
BP	GO:0007528	neuromuscular junction development	IEA	AHRD
BP	GO:0007569	obsolete cell aging	IEA	AHRD
MF	GO:0008134	transcription factor binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0008285	negative regulation of cell population proliferation	IEA	AHRD
BP	GO:0008589	regulation of smoothened signaling pathway	None	Extended
CC	GO:0009295	nucleoid	None	Extended
CC	GO:0009536	plastid	IEA	AHRD
BP	GO:0009558	embryo sac cellularization	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010197	polar nucleus fusion	IEA	AHRD
BP	GO:0010198	synergid death	IEA	AHRD
BP	GO:0010466	negative regulation of peptidase activity	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010563	negative regulation of phosphorus metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010623	programmed cell death involved in cell development	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
BP	GO:0010950	positive regulation of endopeptidase activity	None	Extended
BP	GO:0010951	negative regulation of endopeptidase activity	None	Extended
BP	GO:0010952	positive regulation of peptidase activity	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	None	Extended
BP	GO:0031396	regulation of protein ubiquitination	None	Extended
BP	GO:0031398	positive regulation of protein ubiquitination	IEA	AHRD
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0031647	regulation of protein stability	None	Extended
BP	GO:0032088	negative regulation of NF-kappaB transcription factor activity	IEA	AHRD
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032102	negative regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033673	negative regulation of kinase activity	None	Extended
BP	GO:0034330	cell junction organization	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042326	negative regulation of phosphorylation	None	Extended
CC	GO:0042645	mitochondrial nucleoid	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043065	positive regulation of apoptotic process	IEA	AHRD
BP	GO:0043066	negative regulation of apoptotic process	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
BP	GO:0043086	negative regulation of catalytic activity	None	Extended
BP	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	None	Extended
BP	GO:0043124	negative regulation of I-kappaB kinase/NF-kappaB signaling	IEA	AHRD
BP	GO:0043154	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEA	AHRD
MF	GO:0043167	ion binding	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	None	Extended
BP	GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	None	Extended
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
CC	GO:0045202	synapse	IEA	AHRD
BP	GO:0045824	negative regulation of innate immune response	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045861	negative regulation of proteolysis	None	Extended
BP	GO:0045862	positive regulation of proteolysis	None	Extended
BP	GO:0045879	negative regulation of smoothened signaling pathway	IEA	AHRD
BP	GO:0045892	negative regulation of DNA-templated transcription	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045936	negative regulation of phosphate metabolic process	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050777	negative regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050808	synapse organization	None	Extended
BP	GO:0050821	protein stabilization	IEA	AHRD
MF	GO:0051059	NF-kappaB binding	IEA	AHRD
BP	GO:0051084	'de novo' post-translational protein folding	None	Extended
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEA	AHRD
BP	GO:0051090	regulation of DNA-binding transcription factor activity	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051345	positive regulation of hydrolase activity	None	Extended
BP	GO:0051346	negative regulation of hydrolase activity	None	Extended
BP	GO:0051348	negative regulation of transferase activity	None	Extended
BP	GO:0052547	regulation of peptidase activity	None	Extended
BP	GO:0052548	regulation of endopeptidase activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060330	regulation of response to interferon-gamma	None	Extended
BP	GO:0060331	negative regulation of response to interferon-gamma	None	Extended
BP	GO:0060334	regulation of interferon-gamma-mediated signaling pathway	None	Extended
BP	GO:0060336	negative regulation of interferon-gamma-mediated signaling pathway	IEA	AHRD
BP	GO:0060548	negative regulation of cell death	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0060759	regulation of response to cytokine stimulus	None	Extended
BP	GO:0060761	negative regulation of response to cytokine stimulus	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0061025	membrane fusion	None	Extended
BP	GO:0061077	chaperone-mediated protein folding	None	Extended
MF	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071763	nuclear membrane organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090174	organelle membrane fusion	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
MF	GO:0106137	IkappaB kinase complex binding	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140297	DNA-binding transcription factor binding	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902532	negative regulation of intracellular signal transduction	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000116	regulation of cysteine-type endopeptidase activity	None	Extended
BP	GO:2000117	negative regulation of cysteine-type endopeptidase activity	None	Extended
BP	GO:2001056	positive regulation of cysteine-type endopeptidase activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006555	methionine metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009086	methionine biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0010287	plastoglobule	IEP	Predict GO terms from Neighborhoods
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019509	L-methionine salvage from methylthioadenosine	IEP	Predict GO terms from Neighborhoods
BP	GO:0030435	sporulation resulting in formation of a cellular spore	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0043094	cellular metabolic compound salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0043102	amino acid salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0071265	L-methionine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071267	L-methionine salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:1990641	response to iron ion starvation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001623	DnaJ_domain	68	130
IPR036869	J_dom_sf	68	158

External Links

No external refs found!

SOLTUB.AGRIA.G00000025736

Expression Profile

Co-expression Networks

Functional Annotation