SOLTUB.AGRIA.G00000025738

Description : Ras-related protein Rab-11B

Gene families : OG_02_0015845 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025738
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_22

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	IEA	AHRD
BP	GO:0001881	receptor recycling	IEA	AHRD
BP	GO:0002790	peptide secretion	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	None	Extended
MF	GO:0003925	G protein activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005525	GTP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005773	vacuole	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	AHRD
BP	GO:0006887	exocytosis	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009268	response to pH	None	Extended
BP	GO:0009306	protein secretion	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010447	response to acidic pH	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017022	myosin binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0019003	GDP binding	IEA	AHRD
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0023061	signal release	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030072	peptide hormone secretion	None	Extended
BP	GO:0030073	insulin secretion	None	Extended
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0030666	endocytic vesicle membrane	None	Extended
CC	GO:0030670	phagocytic vesicle membrane	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
MF	GO:0031489	myosin V binding	IEA	AHRD
CC	GO:0031901	early endosome membrane	IEA	AHRD
BP	GO:0032386	regulation of intracellular transport	None	Extended
BP	GO:0032400	melanosome localization	None	Extended
BP	GO:0032401	establishment of melanosome localization	None	Extended
BP	GO:0032402	melanosome transport	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
CC	GO:0032588	trans-Golgi network membrane	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033572	transferrin transport	IEA	AHRD
BP	GO:0035592	establishment of protein localization to extracellular region	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
BP	GO:0035773	insulin secretion involved in cellular response to glucose stimulus	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042546	cell wall biogenesis	IEA	AHRD
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043112	receptor metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0044070	regulation of anion transport	IEA	AHRD
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045054	constitutive secretory pathway	IEA	AHRD
BP	GO:0045055	regulated exocytosis	IEA	AHRD
BP	GO:0045056	transcytosis	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
BP	GO:0046879	hormone secretion	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051648	vesicle localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051650	establishment of vesicle localization	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051875	pigment granule localization	None	Extended
BP	GO:0051904	pigment granule transport	None	Extended
BP	GO:0051905	establishment of pigment granule localization	None	Extended
CC	GO:0055038	recycling endosome membrane	IEA	AHRD
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071467	cellular response to pH	None	Extended
BP	GO:0071468	cellular response to acidic pH	IEA	AHRD
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071692	protein localization to extracellular region	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097242	amyloid-beta clearance	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0098563	intrinsic component of synaptic vesicle membrane	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0098993	anchored component of synaptic vesicle membrane	IEA	AHRD
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140352	export from cell	None	Extended
BP	GO:0150093	amyloid-beta clearance by transcytosis	IEA	AHRD
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000008	regulation of protein localization to cell surface	IEA	AHRD
BP	GO:2001135	regulation of endocytic recycling	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0000825	inositol tetrakisphosphate 6-kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001561	fatty acid alpha-oxidation	IEP	Predict GO terms from Neighborhoods
CC	GO:0005782	peroxisomal matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0006020	inositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007409	axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009441	glycolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009717	isoflavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009799	specification of symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009804	coumarin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009805	coumarin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009854	oxidative photosynthetic carbon pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009908	flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010116	positive regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016514	SWI/SNF complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predict GO terms from Neighborhoods
MF	GO:0016922	nuclear receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019048	modulation by virus of host process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031418	L-ascorbic acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031907	microbody lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033075	isoquinoline alkaloid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033076	isoquinoline alkaloid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033143	regulation of intracellular steroid hormone receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033987	2-hydroxyisoflavanone dehydratase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034308	primary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034310	primary alcohol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035821	modulation of process of another organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0043647	inositol phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044003	modulation by symbiont of host process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044314	protein K27-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0045828	positive regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046164	alcohol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046287	isoflavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046296	glycolate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046662	regulation of oviposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0046835	carbohydrate phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047084	methyltetrahydroprotoberberine 14-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047087	protopine 6-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047325	inositol tetrakisphosphate 1-kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0047484	regulation of response to osmotic stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0048029	monosaccharide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0048244	phytanoyl-CoA dioxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0048367	shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048521	negative regulation of behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0048736	appendage development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050681	nuclear androgen receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050795	regulation of behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051354	negative regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051717	inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051765	inositol tetrakisphosphate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051766	inositol trisphosphate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052725	inositol-1,3,4-trisphosphate 6-kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052726	inositol-1,3,4-trisphosphate 5-kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052743	inositol tetrakisphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052746	inositol phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060148	positive regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060173	limb development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060765	regulation of androgen receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0060964	regulation of miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0071272	morphine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071281	cellular response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0085020	protein K6-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0090092	regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090100	positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090287	regulation of cellular response to growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0090567	reproductive shoot system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0097007	4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0097008	(3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097295	morphine biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0106144	fraxetin 5-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0106146	sideretin biosynthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0106149	indole-3-carbonyl nitrile 4-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900368	regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1900370	positive regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901001	negative regulation of response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1901045	negative regulation of oviposition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901371	regulation of leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901376	organic heteropentacyclic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901378	organic heteropentacyclic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901419	regulation of response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:1902932	positive regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905613	regulation of developmental vegetative growth	IEP	Predict GO terms from Neighborhoods
BP	GO:1905615	positive regulation of developmental vegetative growth	IEP	Predict GO terms from Neighborhoods
BP	GO:1905957	regulation of cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:2000468	regulation of peroxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000469	negative regulation of peroxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000637	positive regulation of miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005225	Small_GTP-bd_dom	12	168
IPR001806	Small_GTPase	15	175
IPR027417	P-loop_NTPase	9	179

External Links

No external refs found!

SOLTUB.AGRIA.G00000025738

Expression Profile

Co-expression Networks

Functional Annotation