SOLTUB.AGRIA.G00000025800

Description : Protein trichome birefringence

Gene families : OG_02_0002620 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025800
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_111

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IEA	AHRD
CC	GO:0005773	vacuole	IEA	AHRD
CC	GO:0005802	trans-Golgi network	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008374	O-acyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009827	plant-type cell wall modification	IEA	AHRD
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016413	O-acetyltransferase activity	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	AHRD
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	AHRD
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
BP	GO:0045489	pectin biosynthetic process	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005513	detection of calcium ion	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005955	calcineurin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006971	hypotonic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009914	hormone transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0009926	auxin polar transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0009930	longitudinal side of cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:0010097	specification of stamen identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010398	xylogalacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010446	response to alkaline pH	IEP	Predict GO terms from Neighborhoods
MF	GO:0010487	thermospermine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010622	specification of ovule identity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016768	spermine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030154	cell differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0031640	killing of cells of another organism	IEP	Predict GO terms from Neighborhoods
CC	GO:0032578	aleurone grain membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034410	cell wall beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042539	hypotonic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0042546	cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043171	peptide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043919	agmatine aminopropyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044085	cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044106	cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0048281	inflorescence morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048283	indeterminate inflorescence morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048869	cellular developmental process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050314	sym-norspermidine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052324	plant-type cell wall cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052582	(+)-menthofuran synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060918	auxin transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097264	self proteolysis	IEP	Predict GO terms from Neighborhoods
MF	GO:0102627	parthenolide 3beta-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102628	costunolide 3beta-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102876	psoralen synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102995	angelicin synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901428	regulation of syringal lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901430	positive regulation of syringal lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905177	tracheary element differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:1990538	xylan O-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990937	xylan acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR026057	PC-Esterase	351	538
IPR026057	PC-Esterase	1	155
IPR026057	PC-Esterase	157	270
IPR026057	PC-Esterase	272	350

External Links

No external refs found!

SOLTUB.AGRIA.G00000025800

Expression Profile

Co-expression Networks

Functional Annotation