SOLTUB.AGRIA.G00000025913

Description : Ankyrin repeat-containing protein

Gene families : OG_02_0000123 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025913
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_240

Type	GO Term	Name	Evidence	Source
BP	GO:0001508	action potential	None	Extended
BP	GO:0002376	immune system process	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
BP	GO:0006937	regulation of muscle contraction	None	Extended
BP	GO:0006942	regulation of striated muscle contraction	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007165	signal transduction	IEA	AHRD
BP	GO:0007399	nervous system development	IEA	AHRD
BP	GO:0008016	regulation of heart contraction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010646	regulation of cell communication	IEA	AHRD
BP	GO:0010959	regulation of metal ion transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0019899	enzyme binding	IEA	AHRD
BP	GO:0022898	regulation of transmembrane transporter activity	None	Extended
CC	GO:0030016	myofibril	IEA	AHRD
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030424	axon	IEA	AHRD
BP	GO:0031347	regulation of defense response	IEA	AHRD
BP	GO:0032409	regulation of transporter activity	None	Extended
BP	GO:0032411	positive regulation of transporter activity	None	Extended
BP	GO:0032412	regulation of ion transmembrane transporter activity	None	Extended
BP	GO:0032414	positive regulation of ion transmembrane transporter activity	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034764	positive regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0034767	positive regulation of ion transmembrane transport	None	Extended
BP	GO:0042221	response to chemical	IEA	AHRD
BP	GO:0042391	regulation of membrane potential	None	Extended
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043005	neuron projection	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043266	regulation of potassium ion transport	IEA	AHRD
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043270	positive regulation of ion transport	None	Extended
CC	GO:0043292	contractile fiber	None	Extended
BP	GO:0044057	regulation of system process	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
CC	GO:0045202	synapse	IEA	AHRD
BP	GO:0048468	cell development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051050	positive regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	IEA	AHRD
BP	GO:0051924	regulation of calcium ion transport	None	Extended
BP	GO:0055117	regulation of cardiac muscle contraction	IEA	AHRD
BP	GO:0061024	membrane organization	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0072659	protein localization to plasma membrane	IEA	AHRD
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0086001	cardiac muscle cell action potential	IEA	AHRD
BP	GO:0086065	cell communication involved in cardiac conduction	IEA	AHRD
BP	GO:0090257	regulation of muscle system process	None	Extended
CC	GO:0098590	plasma membrane region	IEA	AHRD
BP	GO:0098900	regulation of action potential	IEA	AHRD
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:1903169	regulation of calcium ion transmembrane transport	IEA	AHRD
BP	GO:1903522	regulation of blood circulation	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended
BP	GO:1904064	positive regulation of cation transmembrane transport	IEA	AHRD
BP	GO:1990778	protein localization to cell periphery	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0000460	maturation of 5.8S rRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000470	maturation of LSU-rRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Predict GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0017148	negative regulation of translation	IEP	Predict GO terms from Neighborhoods
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0030687	preribosome, large subunit precursor	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034249	negative regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044304	main axon	IEP	Predict GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0062105	RNA 2'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predict GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR026961	PGG_dom	360	478
IPR036770	Ankyrin_rpt-contain_sf	30	234
IPR020683	DUF3447	64	130
IPR020683	DUF3447	254	332
IPR036770	Ankyrin_rpt-contain_sf	248	333

External Links

No external refs found!

SOLTUB.AGRIA.G00000025913

Expression Profile

Co-expression Networks

Functional Annotation