SOLTUB.AGRIA.G00000025955


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_02_0003062 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025955
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_142


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0002694 regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0003333 amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009609 response to symbiotic bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009624 response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0009627 systemic acquired resistance IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010103 stomatal complex morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010191 mucilage metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0010297 heteropolysaccharide binding IEP Predict GO terms from Neighborhoods
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015802 basic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015807 L-amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015822 ornithine transport IEP Predict GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0032881 regulation of polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043102 amino acid salvage IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Predict GO terms from Neighborhoods
MF GO:0050525 cutinase activity IEP Predict GO terms from Neighborhoods
BP GO:0050865 regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0071265 L-methionine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071267 L-methionine salvage IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080144 amino acid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0089718 amino acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0090626 plant epidermis morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097264 self proteolysis IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
BP GO:0098739 import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1900367 positive regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1902022 L-lysine transport IEP Predict GO terms from Neighborhoods
BP GO:1902066 regulation of cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903401 L-lysine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903826 L-arginine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990822 basic amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000068 regulation of defense response to insect IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!