SOLTUB.AGRIA.G00000002698

Description : GRAS family transcription factor, putative

Gene families : OG_02_0018183 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002698
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_198

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	AHRD
BP	GO:0006950	response to stress	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010029	regulation of seed germination	IEA	AHRD
BP	GO:0010468	regulation of gene expression	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEA	AHRD
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	IEA	AHRD
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	IEA	AHRD
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	IEA	AHRD
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	IEA	AHRD
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	IEA	AHRD
BP	GO:1900140	regulation of seedling development	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEA	AHRD
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0000302	response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:0001558	regulation of cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004708	MAP kinase kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005819	spindle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007051	spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007399	nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009792	embryo development ending in birth or egg hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0009967	positive regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010075	regulation of meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010082	regulation of root meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010119	regulation of stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010647	positive regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010941	regulation of cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010942	positive regulation of cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019901	protein kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0022604	regulation of cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0023056	positive regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032872	regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0032874	positive regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0035173	histone kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0035174	histone serine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035404	obsolete histone-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042127	regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042981	regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043009	chordate embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0043065	positive regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043067	regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043068	positive regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043408	regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0043410	positive regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0045088	regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045595	regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046777	protein autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048513	animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048568	embryonic organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048608	reproductive structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048638	regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0051094	positive regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051301	cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0070302	regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070304	positive regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0072359	circulatory system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090333	regulation of stomatal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:1900055	regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900057	positive regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900150	regulation of defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:1900424	regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1901419	regulation of response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:1902456	regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1902457	negative regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905957	regulation of cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:2000038	regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000071	regulation of defense response by callose deposition	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005202	TF_GRAS	154	523

External Links

No external refs found!

SOLTUB.AGRIA.G00000002698

Expression Profile

Co-expression Networks

Functional Annotation