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  5. SOLTUB.AGRIA.G00000026067

SOLTUB.AGRIA.G00000026067


Description : fiber (DUF1218)


Gene families : OG_02_0015937 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026067
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_157


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0002218 activation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0002252 immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0003032 detection of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009624 response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0009644 response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0009735 response to cytokinin IEP Predict GO terms from Neighborhoods
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010286 heat acclimation IEP Predict GO terms from Neighborhoods
BP GO:0016134 saponin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016135 saponin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016137 glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016138 glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0034059 response to anoxia IEP Predict GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048825 cotyledon development IEP Predict GO terms from Neighborhoods
BP GO:0050826 response to freezing IEP Predict GO terms from Neighborhoods
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070417 cellular response to cold IEP Predict GO terms from Neighborhoods
BP GO:0070483 detection of hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071454 cellular response to anoxia IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071497 cellular response to freezing IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902532 negative regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 58 154
No external refs found!