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  5. SOLTUB.AGRIA.G00000026339

SOLTUB.AGRIA.G00000026339


Description : Vesicle transport protein


Gene families : OG_02_0004013 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026339
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_237

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000026350 No alias Vesicle transport protein 0.12 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000026350 No alias Vesicle transport protein 0.12 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000026350 No alias Vesicle transport protein 0.12 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0016192 vesicle-mediated transport IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0000132 establishment of mitotic spindle orientation IEP Predict GO terms from Neighborhoods
MF GO:0000339 RNA cap binding IEP Predict GO terms from Neighborhoods
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Predict GO terms from Neighborhoods
CC GO:0000407 phagophore assembly site IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0001570 vasculogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0005539 glycosaminoglycan binding IEP Predict GO terms from Neighborhoods
CC GO:0005776 autophagosome IEP Predict GO terms from Neighborhoods
CC GO:0005845 mRNA cap binding complex IEP Predict GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007033 vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007420 brain development IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008201 heparin binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008276 protein methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010656 negative regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010660 regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010662 regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010664 negative regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010665 regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010667 negative regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010941 regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0010976 positive regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014015 positive regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014028 notochord formation IEP Predict GO terms from Neighborhoods
BP GO:0014866 skeletal myofibril assembly IEP Predict GO terms from Neighborhoods
MF GO:0016278 lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0016281 eukaryotic translation initiation factor 4F complex IEP Predict GO terms from Neighborhoods
BP GO:0018992 germ-line sex determination IEP Predict GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Predict GO terms from Neighborhoods
BP GO:0030029 actin filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030239 myofibril assembly IEP Predict GO terms from Neighborhoods
CC GO:0030667 secretory granule membrane IEP Predict GO terms from Neighborhoods
BP GO:0031032 actomyosin structure organization IEP Predict GO terms from Neighborhoods
BP GO:0031033 myosin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0031034 myosin filament assembly IEP Predict GO terms from Neighborhoods
CC GO:0031166 integral component of vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0031310 intrinsic component of vacuolar membrane IEP Predict GO terms from Neighborhoods
BP GO:0031348 negative regulation of defense response IEP Predict GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0031370 eukaryotic initiation factor 4G binding IEP Predict GO terms from Neighborhoods
CC GO:0031430 M band IEP Predict GO terms from Neighborhoods
CC GO:0031674 I band IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0032006 regulation of TOR signaling IEP Predict GO terms from Neighborhoods
BP GO:0032008 positive regulation of TOR signaling IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
CC GO:0032154 cleavage furrow IEP Predict GO terms from Neighborhoods
BP GO:0032886 regulation of microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0032887 regulation of spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0032888 regulation of mitotic spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0034051 negative regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034059 response to anoxia IEP Predict GO terms from Neighborhoods
CC GO:0034518 RNA cap binding complex IEP Predict GO terms from Neighborhoods
CC GO:0036477 somatodendritic compartment IEP Predict GO terms from Neighborhoods
BP GO:0040001 establishment of mitotic spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0042552 myelination IEP Predict GO terms from Neighborhoods
BP GO:0042759 long-chain fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043067 regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043069 negative regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
CC GO:0045202 synapse IEP Predict GO terms from Neighborhoods
BP GO:0045685 regulation of glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045687 positive regulation of glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0048255 mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048713 regulation of oligodendrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048714 positive regulation of oligodendrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050687 negative regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050688 regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051293 establishment of spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0051294 establishment of spindle orientation IEP Predict GO terms from Neighborhoods
BP GO:0051653 spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0060034 notochord cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060548 negative regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Predict GO terms from Neighborhoods
CC GO:0071627 integral component of fungal-type vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0071628 intrinsic component of fungal-type vacuolar membrane IEP Predict GO terms from Neighborhoods
BP GO:0071688 striated muscle myosin thick filament assembly IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
MF GO:0097602 cullin family protein binding IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902373 negative regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903432 regulation of TORC1 signaling IEP Predict GO terms from Neighborhoods
BP GO:1904263 positive regulation of TORC1 signaling IEP Predict GO terms from Neighborhoods
BP GO:1905037 autophagosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007305 Vesicle_transpt_Got1/SFT2 108 220
No external refs found!