SOLTUB.AGRIA.G00000026731

Description : Carotenoid cleavage dioxygenase

Gene families : OG_02_0001909 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026731
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_703

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008300	isoprenoid catabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009687	abscisic acid metabolic process	None	Extended
BP	GO:0009688	abscisic acid biosynthetic process	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009739	response to gibberellin	IEA	AHRD
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009835	fruit ripening	IEA	AHRD
BP	GO:0009856	pollination	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010114	response to red light	IEA	AHRD
BP	GO:0010162	seed dormancy process	IEA	AHRD
CC	GO:0010287	plastoglobule	IEA	AHRD
MF	GO:0010436	carotenoid dioxygenase activity	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016110	tetraterpenoid catabolic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016115	terpenoid catabolic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	None	Extended
BP	GO:0016118	carotenoid catabolic process	None	Extended
BP	GO:0016119	carotene metabolic process	None	Extended
BP	GO:0016120	carotene biosynthetic process	None	Extended
BP	GO:0016121	carotene catabolic process	IEA	AHRD
BP	GO:0016122	xanthophyll metabolic process	None	Extended
BP	GO:0016123	xanthophyll biosynthetic process	IEA	AHRD
BP	GO:0016124	xanthophyll catabolic process	IEA	AHRD
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042214	terpene metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0042538	hyperosmotic salinity response	IEA	AHRD
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043289	apocarotenoid biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEA	AHRD
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046246	terpene biosynthetic process	None	Extended
BP	GO:0046247	terpene catabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048653	anther development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120253	hydrocarbon catabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1901175	lycopene metabolic process	None	Extended
BP	GO:1901177	lycopene biosynthetic process	IEA	AHRD
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901810	beta-carotene metabolic process	None	Extended
BP	GO:1901812	beta-carotene biosynthetic process	IEA	AHRD
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1902645	tertiary alcohol biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0010154	fruit development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	95	567

External Links

No external refs found!

SOLTUB.AGRIA.G00000026731

Expression Profile

Co-expression Networks

Functional Annotation