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  5. SOLTUB.AGRIA.G00000026797

SOLTUB.AGRIA.G00000026797


Description : B3 domain-containing protein rem10


Gene families : OG_02_0021643 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026797
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_139

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000026796 No alias B3 domain-containing protein rem17 0.02 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0009791 post-embryonic development IEA AHRD
BP GO:0048608 reproductive structure development IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000326 protein storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000328 fungal-type vacuole lumen IEP Predict GO terms from Neighborhoods
MF GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004303 estradiol 17-beta-dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005496 steroid binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005764 lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005811 lipid droplet IEP Predict GO terms from Neighborhoods
BP GO:0006624 vacuolar protein processing IEP Predict GO terms from Neighborhoods
BP GO:0006972 hyperosmotic response IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009409 response to cold IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010234 anther wall tapetum cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010431 seed maturation IEP Predict GO terms from Neighborhoods
BP GO:0010507 negative regulation of autophagy IEP Predict GO terms from Neighborhoods
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predict GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Predict GO terms from Neighborhoods
BP GO:0016101 diterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016102 diterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016103 diterpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Predict GO terms from Neighborhoods
BP GO:0019953 sexual reproduction IEP Predict GO terms from Neighborhoods
BP GO:0021700 developmental maturation IEP Predict GO terms from Neighborhoods
BP GO:0032365 intracellular lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032366 intracellular sterol transport IEP Predict GO terms from Neighborhoods
MF GO:0032934 sterol binding IEP Predict GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0044594 17-beta-hydroxysteroid dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
BP GO:0045487 gibberellin catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0050826 response to freezing IEP Predict GO terms from Neighborhoods
BP GO:0050921 positive regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Predict GO terms from Neighborhoods
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
CC GO:0062039 biofilm matrix IEP Predict GO terms from Neighborhoods
CC GO:0062040 fungal biofilm matrix IEP Predict GO terms from Neighborhoods
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP Predict GO terms from Neighborhoods
BP GO:0071695 anatomical structure maturation IEP Predict GO terms from Neighborhoods
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP Predict GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990019 protein storage vacuole organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR015300 DNA-bd_pseudobarrel_sf 134 226
IPR003340 B3_DNA-bd 4 73
IPR003340 B3_DNA-bd 138 223
IPR015300 DNA-bd_pseudobarrel_sf 3 78
No external refs found!