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  5. SOLTUB.AGRIA.G00000002825

SOLTUB.AGRIA.G00000002825


Description : RmlC-like cupins superfamily protein


Gene families : OG_02_0000074 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002825
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9


Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA AHRD
CC GO:0031012 extracellular matrix IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0001667 ameboidal-type cell migration IEP Predict GO terms from Neighborhoods
BP GO:0001702 gastrulation with mouth forming second IEP Predict GO terms from Neighborhoods
BP GO:0002009 morphogenesis of an epithelium IEP Predict GO terms from Neighborhoods
MF GO:0003979 UDP-glucose 6-dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006023 aminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006065 UDP-glucuronate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006560 proline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006561 proline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007365 periodic partitioning IEP Predict GO terms from Neighborhoods
BP GO:0007367 segment polarity determination IEP Predict GO terms from Neighborhoods
BP GO:0007369 gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0007427 epithelial cell migration, open tracheal system IEP Predict GO terms from Neighborhoods
BP GO:0007509 mesoderm migration involved in gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0008078 mesodermal cell migration IEP Predict GO terms from Neighborhoods
BP GO:0008543 fibroblast growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009225 nucleotide-sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009267 cellular response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0009411 response to UV IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009696 salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009745 sucrose mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009756 carbohydrate mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009800 cinnamic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009803 cinnamic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010090 trichome morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010182 sugar mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010192 mucilage biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0010301 xanthoxin dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0010584 pollen exine formation IEP Predict GO terms from Neighborhoods
BP GO:0010631 epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016098 monoterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016099 monoterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016139 glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0018458 isopiperitenol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0018459 carveol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0018991 oviposition IEP Predict GO terms from Neighborhoods
BP GO:0019098 reproductive behavior IEP Predict GO terms from Neighborhoods
BP GO:0019430 removal of superoxide radicals IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Predict GO terms from Neighborhoods
BP GO:0030203 glycosaminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030204 chondroitin sulfate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030206 chondroitin sulfate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031524 menthol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031525 menthol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031537 regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031542 positive regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0034214 protein hexamerization IEP Predict GO terms from Neighborhoods
BP GO:0035987 endodermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0040025 vulval development IEP Predict GO terms from Neighborhoods
BP GO:0042074 cell migration involved in gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043455 regulation of secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046398 UDP-glucuronate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046593 mandelonitrile lyase activity IEP Predict GO terms from Neighborhoods
CC GO:0048226 Casparian strip IEP Predict GO terms from Neighborhoods
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0048569 post-embryonic animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
MF GO:0050529 polyneuridine-aldehyde esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051262 protein tetramerization IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0051289 protein homotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0052546 cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080031 methyl salicylate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080032 methyl jasmonate esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0090130 tissue migration IEP Predict GO terms from Neighborhoods
MF GO:0102911 (-)-secoisolariciresinol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:1900377 negative regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900384 regulation of flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900386 positive regulation of flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902652 secondary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902653 secondary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902930 regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903085 regulation of sinapate ester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903086 negative regulation of sinapate ester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903510 mucopolysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000067 regulation of root morphogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006045 Cupin_1 77 216
IPR011051 RmlC_Cupin_sf 25 223
No external refs found!