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  5. SOLTUB.AGRIA.G00000002827

SOLTUB.AGRIA.G00000002827


Description : RmlC-like cupins superfamily protein


Gene families : OG_02_0000074 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002827
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9


Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA AHRD
CC GO:0031012 extracellular matrix IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000242 pericentriolar material IEP Predict GO terms from Neighborhoods
BP GO:0001822 kidney development IEP Predict GO terms from Neighborhoods
BP GO:0001906 cell killing IEP Predict GO terms from Neighborhoods
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
CC GO:0005794 Golgi apparatus IEP Predict GO terms from Neighborhoods
BP GO:0006560 proline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006561 proline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009694 jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009696 salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009863 salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010266 response to vitamin B1 IEP Predict GO terms from Neighborhoods
MF GO:0010301 xanthoxin dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0010364 regulation of ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010366 negative regulation of ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0015692 lead ion transport IEP Predict GO terms from Neighborhoods
BP GO:0016137 glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016139 glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0018458 isopiperitenol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0018459 carveol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0018958 phenol-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030010 establishment of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0031335 regulation of sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031336 negative regulation of sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031524 menthol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031525 menthol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031640 killing of cells of another organism IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
CC GO:0034451 centriolar satellite IEP Predict GO terms from Neighborhoods
BP GO:0035264 multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0035834 indole alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042769 obsolete DNA damage response, detection of DNA damage IEP Predict GO terms from Neighborhoods
MF GO:0046593 mandelonitrile lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0050529 polyneuridine-aldehyde esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0051175 negative regulation of sulfur metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
MF GO:0071889 14-3-3 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080031 methyl salicylate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080032 methyl jasmonate esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0080168 abscisic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0090043 regulation of tubulin deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090311 regulation of protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090332 stomatal closure IEP Predict GO terms from Neighborhoods
MF GO:0102911 (-)-secoisolariciresinol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:1900908 regulation of olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900909 negative regulation of olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900911 regulation of olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900912 negative regulation of olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901976 regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1902653 secondary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000001 regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000772 regulation of cellular senescence IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006045 Cupin_1 77 206
IPR011051 RmlC_Cupin_sf 25 213
No external refs found!