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  5. SOLTUB.AGRIA.G00000027436

SOLTUB.AGRIA.G00000027436


Description : Transposase tnp2


Gene families : OG_02_0018033 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027436
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_70

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000030783 No alias TdcA1-ORF1-ORF2 protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.1 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030783 No alias TdcA1-ORF1-ORF2 protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.1 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030783 No alias TdcA1-ORF1-ORF2 protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.1 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029480 Transpos_assoc 10 78
IPR025452 DUF4218 117 165
No external refs found!