SOLTUB.AGRIA.G00000002842

Description : F-box protein fbw2

Gene families : OG_02_0033393 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002842
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_115

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	IEA	AHRD
BP	GO:0010629	negative regulation of gene expression	IEA	AHRD
BP	GO:0016567	protein ubiquitination	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000118	histone deacetylase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000966	RNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0001505	regulation of neurotransmitter levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0001523	retinoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001682	tRNA 5'-leader removal	IEP	Predict GO terms from Neighborhoods
MF	GO:0001758	retinal dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001894	tissue homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0004032	alditol:NADP+ 1-oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004521	endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004526	ribonuclease P activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004549	tRNA-specific ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004743	pyruvate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004777	succinate-semialdehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005902	microvillus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006000	fructose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006059	hexitol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006060	sorbitol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006061	sorbitol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006105	succinate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006334	nucleosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006536	glutamate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006538	glutamate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006540	glutamate decarboxylation to succinate	IEP	Predict GO terms from Neighborhoods
BP	GO:0006549	isoleucine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006553	lysine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006554	lysine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006573	valine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006584	catecholamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006700	C21-steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006757	ATP generation from ADP	IEP	Predict GO terms from Neighborhoods
BP	GO:0007417	central nervous system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0008106	alcohol dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008207	C21-steroid hormone metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0009013	succinate-semialdehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009065	glutamine family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009097	isoleucine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009099	valine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009448	gamma-aminobutyric acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009450	gamma-aminobutyric acid catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009712	catechol-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010431	seed maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0016074	sno(s)RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predict GO terms from Neighborhoods
BP	GO:0018023	peptidyl-lysine trimethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0018505	cis-1,2-dihydro-1,2-dihydroxynaphthalene dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019321	pentose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019400	alditol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019401	alditol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019406	hexitol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019477	L-lysine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030638	polyketide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030647	aminoglycoside antibiotic metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030955	potassium ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031098	stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0031157	regulation of aggregate size involved in sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031158	negative regulation of aggregate size involved in sorocarp development	IEP	Predict GO terms from Neighborhoods
MF	GO:0031420	alkali metal ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031514	motile cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0031519	PcG protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032104	regulation of response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0032107	regulation of response to nutrient levels	IEP	Predict GO terms from Neighborhoods
CC	GO:0032838	plasma membrane bounded cell projection cytoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0033010	paranodal junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0033500	carbohydrate homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0034308	primary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034708	methyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034728	nucleosome organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0035097	histone methyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0035098	ESC/E(Z) complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0036243	succinate-semialdehyde dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042133	neurotransmitter metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042135	neurotransmitter catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042399	ectoine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042400	ectoine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042415	norepinephrine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042593	glucose homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0042629	mast cell granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0043144	sno(s)RNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043220	Schmidt-Lanterman incisure	IEP	Predict GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043649	dicarboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043795	glyceraldehyde oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043966	histone H3 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044597	daunorubicin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044598	doxorubicin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046031	ADP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046370	fructose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046425	regulation of receptor signaling pathway via JAK-STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:0046427	positive regulation of receptor signaling pathway via JAK-STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:0046440	L-lysine metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046939	nucleotide phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047641	aldose-6-phosphate reductase (NADPH) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047834	D-threo-aldose 1-dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047949	glutarate-semialdehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048609	multicellular organismal reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048660	regulation of smooth muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048661	positive regulation of smooth muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051289	protein homotetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051568	histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051595	response to methylglyoxal	IEP	Predict GO terms from Neighborhoods
BP	GO:0060135	maternal process involved in female pregnancy	IEP	Predict GO terms from Neighborhoods
BP	GO:0060176	regulation of aggregation involved in sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060249	anatomical structure homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0062197	cellular response to chemical stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0065004	protein-DNA complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0070402	NADPH binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070734	histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071474	cellular hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0071475	cellular hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0072044	collecting duct development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072061	inner medullary collecting duct development	IEP	Predict GO terms from Neighborhoods
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0080182	histone H3-K4 trimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097066	response to thyroid hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0097238	cellular response to methylglyoxal	IEP	Predict GO terms from Neighborhoods
CC	GO:0097386	glial cell projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0097454	Schwann cell microvillus	IEP	Predict GO terms from Neighborhoods
BP	GO:0098532	histone H3-K27 trimethylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098858	actin-based cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0099116	tRNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0099568	cytoplasmic region	IEP	Predict GO terms from Neighborhoods
MF	GO:0102810	glutarate-semialdehyde dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0110096	cellular response to aldehyde	IEP	Predict GO terms from Neighborhoods
BP	GO:0120178	steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901653	cellular response to peptide	IEP	Predict GO terms from Neighborhoods
BP	GO:1901655	cellular response to ketone	IEP	Predict GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904892	regulation of receptor signaling pathway via STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:1904894	positive regulation of receptor signaling pathway via STAT	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	39	81
IPR036047	F-box-like_dom_sf	31	92

External Links

No external refs found!

SOLTUB.AGRIA.G00000002842

Expression Profile

Co-expression Networks

Functional Annotation