Description : Zinc finger C-x8-C-x5-C-x3-H type family protein
Gene families : OG_02_0004381 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027662 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_67 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | AHRD |
| MF | GO:0003676 | nucleic acid binding | IEA | AHRD |
| MF | GO:0003677 | DNA binding | IEA | AHRD |
| MF | GO:0003723 | RNA binding | IEA | AHRD |
| CC | GO:0005681 | spliceosomal complex | IEA | AHRD |
| MF | GO:0030628 | pre-mRNA 3'-splice site binding | IEA | AHRD |
| MF | GO:0046872 | metal ion binding | IEA | AHRD |
| CC | GO:0089701 | U2AF complex | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002218 | activation of innate immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002757 | immune response-activating signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002758 | innate immune response-activating signal transduction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005516 | calmodulin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005797 | Golgi medial cisterna | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007263 | nitric oxide mediated signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009682 | induced systemic resistance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009863 | salicylic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009937 | regulation of gibberellic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019932 | second-messenger-mediated signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031985 | Golgi cisterna | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080147 | root hair cell development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990841 | promoter-specific chromatin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000022 | regulation of jasmonic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |