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  5. SOLTUB.AGRIA.G00000002870

SOLTUB.AGRIA.G00000002870


Description : Plasma-membrane choline transporter family protein


Gene families : OG_02_0018206 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002870
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_218


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEA AHRD
CC GO:0005575 cellular_component IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0008150 biological_process IEA AHRD
CC GO:0016020 membrane IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
MF GO:0022857 transmembrane transporter activity IEA AHRD
BP GO:0055085 transmembrane transport IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0001653 peptide receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
MF GO:0003987 acetate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005221 intracellular cyclic nucleotide activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005222 intracellular cAMP-activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005223 intracellular cGMP-activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005242 inward rectifier potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005244 voltage-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005249 voltage-gated potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005267 potassium channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Predict GO terms from Neighborhoods
CC GO:0005880 nuclear microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007263 nitric oxide mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009509 chromoplast IEP Predict GO terms from Neighborhoods
BP GO:0009554 megasporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009860 pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:0009932 cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0009933 meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010009 cytoplasmic side of endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0010093 specification of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010143 cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010254 nectary development IEP Predict GO terms from Neighborhoods
BP GO:0010321 regulation of vegetative phase change IEP Predict GO terms from Neighborhoods
BP GO:0010342 endosperm cellularization IEP Predict GO terms from Neighborhoods
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010444 guard mother cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010450 inflorescence meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010746 regulation of long-chain fatty acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010747 positive regulation of long-chain fatty acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010866 regulation of triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010867 positive regulation of triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015276 ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015645 fatty acid ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0016103 diterpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016207 4-coumarate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016405 CoA-ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predict GO terms from Neighborhoods
MF GO:0016878 acid-thiol ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0018858 benzoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0019216 regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predict GO terms from Neighborhoods
BP GO:0019605 butyrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019932 second-messenger-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0022008 neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022843 voltage-gated cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
MF GO:0030551 cyclic nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0030552 cAMP binding IEP Predict GO terms from Neighborhoods
MF GO:0030553 cGMP binding IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Predict GO terms from Neighborhoods
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031542 positive regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0031957 very long-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0032351 negative regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032368 regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032370 positive regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032869 cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032890 regulation of organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0032892 positive regulation of organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0033198 response to ATP IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035266 meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0035336 long-chain fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035338 long-chain fatty-acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035384 thioester biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0036314 response to sterol IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
CC GO:0042579 microbody IEP Predict GO terms from Neighborhoods
MF GO:0043425 bHLH transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IEP Predict GO terms from Neighborhoods
MF GO:0043759 methylbutanoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0043855 cyclic nucleotide-gated ion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0044325 transmembrane transporter binding IEP Predict GO terms from Neighborhoods
MF GO:0045330 aspartyl esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0045487 gibberellin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046459 short-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046890 regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046910 pectinesterase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047676 arachidonate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0047760 butyrate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0048444 floral organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048479 style development IEP Predict GO terms from Neighborhoods
BP GO:0048509 regulation of meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048530 fruit morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048589 developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048608 reproductive structure development IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048657 anther wall tapetum cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048699 generation of neurons IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
MF GO:0050218 propionate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0050764 regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0050766 positive regulation of phagocytosis IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0060560 developmental growth involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0070509 calcium ion import IEP Predict GO terms from Neighborhoods
BP GO:0070723 response to cholesterol IEP Predict GO terms from Neighborhoods
BP GO:0071318 cellular response to ATP IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0071616 acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080154 regulation of fertilization IEP Predict GO terms from Neighborhoods
BP GO:0090207 regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090208 positive regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090356 negative regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090357 regulation of tryptophan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090701 specification of plant organ identity IEP Predict GO terms from Neighborhoods
BP GO:0090706 specification of plant organ position IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0099094 ligand-gated cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:0106167 extracellular ATP signaling IEP Predict GO terms from Neighborhoods
MF GO:0106286 (E)-caffeate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106290 trans-cinnamate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0140212 regulation of long-chain fatty acid import into cell IEP Predict GO terms from Neighborhoods
BP GO:0140214 positive regulation of long-chain fatty acid import into cell IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1905516 positive regulation of fertilization IEP Predict GO terms from Neighborhoods
BP GO:1905954 positive regulation of lipid localization IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000191 regulation of fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:2000193 positive regulation of fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000243 positive regulation of reproductive process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 278 562
No external refs found!