SOLTUB.AGRIA.G00000027920

Description : Unknown protein

Gene families : OG_02_0000162 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027920
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_92

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006508	proteolysis	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	IEA	AHRD
MF	GO:0008234	cysteine-type peptidase activity	IEA	AHRD
BP	GO:0009909	regulation of flower development	IEA	AHRD
BP	GO:0009911	positive regulation of flower development	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0016787	hydrolase activity	IEA	AHRD
BP	GO:0016926	protein desumoylation	IEA	AHRD
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031965	nuclear membrane	IEA	AHRD
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070137	ubiquitin-like protein-specific endopeptidase activity	None	Extended
MF	GO:0070139	SUMO-specific endopeptidase activity	IEA	AHRD
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000243	positive regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000162	tryptophan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004049	anthranilate synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005950	anthranilate synthase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	Predict GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009501	amyloplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009830	cell wall modification involved in abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0044277	cell wall disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048467	gynoecium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Predict GO terms from Neighborhoods
MF	GO:0051787	misfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0061635	regulation of protein complex stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0071629	cytoplasm protein quality control by the ubiquitin-proteasome system	IEP	Predict GO terms from Neighborhoods
BP	GO:0090354	regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090378	seed trichome elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0140455	cytoplasm protein quality control	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	564	688
IPR038765	Papain-like_cys_pep_sf	565	711
IPR015410	DUF1985	4	122

External Links

No external refs found!

SOLTUB.AGRIA.G00000027920

Expression Profile

Co-expression Networks

Functional Annotation