SOLTUB.AGRIA.G00000028088


Description : Ankyrin repeat family protein, putative


Gene families : OG_02_0000464 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028088
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_158

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000028090 No alias Ankyrin repeat family protein, putative 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028090 No alias Ankyrin repeat family protein, putative 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028090 No alias Ankyrin repeat family protein, putative 0.03 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA AHRD
CC GO:0005856 cytoskeleton IEA AHRD
BP GO:0006928 obsolete movement of cell or subcellular component IEA AHRD
BP GO:0007165 signal transduction IEA AHRD
BP GO:0009751 response to salicylic acid IEA AHRD
BP GO:0010647 positive regulation of cell communication IEA AHRD
CC GO:0012505 endomembrane system IEA AHRD
BP GO:0016192 vesicle-mediated transport IEA AHRD
MF GO:0019899 enzyme binding IEA AHRD
BP GO:0023051 regulation of signaling IEA AHRD
CC GO:0030017 sarcomere IEA AHRD
BP GO:0031323 regulation of cellular metabolic process IEA AHRD
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEA AHRD
BP GO:0032989 cellular component morphogenesis IEA AHRD
BP GO:0033365 protein localization to organelle IEA AHRD
BP GO:0034330 cell junction organization IEA AHRD
BP GO:0043266 regulation of potassium ion transport IEA AHRD
CC GO:0044304 main axon IEA AHRD
BP GO:0045087 innate immune response IEA AHRD
BP GO:0045184 establishment of protein localization IEA AHRD
CC GO:0045202 synapse IEA AHRD
BP GO:0048523 negative regulation of cellular process IEA AHRD
BP GO:0048666 neuron development IEA AHRD
BP GO:0055065 metal ion homeostasis IEA AHRD
BP GO:0055117 regulation of cardiac muscle contraction IEA AHRD
BP GO:0060255 regulation of macromolecule metabolic process IEA AHRD
BP GO:0060341 regulation of cellular localization IEA AHRD
BP GO:0061024 membrane organization IEA AHRD
BP GO:0072659 protein localization to plasma membrane IEA AHRD
BP GO:0086019 cell-cell signaling involved in cardiac conduction IEA AHRD
BP GO:0086070 SA node cell to atrial cardiac muscle cell communication IEA AHRD
CC GO:0098590 plasma membrane region IEA AHRD
BP GO:0098901 regulation of cardiac muscle cell action potential IEA AHRD
BP GO:1903169 regulation of calcium ion transmembrane transport IEA AHRD
BP GO:1904064 positive regulation of cation transmembrane transport IEA AHRD
BP GO:2001257 regulation of cation channel activity IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000326 protein storage vacuole IEP Predict GO terms from Neighborhoods
BP GO:0002218 activation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0002220 innate immune response activating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002221 pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002237 response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0002238 response to molecule of fungal origin IEP Predict GO terms from Neighborhoods
BP GO:0002253 activation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0002429 immune response-activating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002752 cell surface pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002757 immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002758 innate immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002764 immune response-regulating signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0004888 transmembrane signaling receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005216 ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005261 cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005775 vacuolar lumen IEP Predict GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0006816 calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006873 cellular ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007166 cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009595 detection of biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009609 response to symbiotic bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009877 nodulation IEP Predict GO terms from Neighborhoods
MF GO:0015085 calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Predict GO terms from Neighborhoods
MF GO:0019199 transmembrane receptor protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030003 cellular cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0032490 detection of molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0032491 detection of molecule of fungal origin IEP Predict GO terms from Neighborhoods
BP GO:0032494 response to peptidoglycan IEP Predict GO terms from Neighborhoods
BP GO:0032499 detection of peptidoglycan IEP Predict GO terms from Neighborhoods
MF GO:0038023 signaling receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0043621 protein self-association IEP Predict GO terms from Neighborhoods
BP GO:0045089 positive regulation of innate immune response IEP Predict GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Predict GO terms from Neighborhoods
MF GO:0060089 molecular transducer activity IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071219 cellular response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0071310 cellular response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0071323 cellular response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0071495 cellular response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0098581 detection of external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1901701 cellular response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
MF GO:2001080 chitosan binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR020683 DUF3447 8 92
IPR020683 DUF3447 239 310
IPR020683 DUF3447 103 162
IPR020683 DUF3447 173 232
IPR026961 PGG_dom 416 521
IPR036770 Ankyrin_rpt-contain_sf 8 344
No external refs found!