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  5. SOLTUB.AGRIA.G00000028130

SOLTUB.AGRIA.G00000028130


Description : Ran BP2/NZF zinc finger-like superfamily protein


Gene families : OG_02_0016117 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028130
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_41


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA AHRD
MF GO:0003723 RNA binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
BP GO:0008150 biological_process IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0000212 meiotic spindle organization IEP Predict GO terms from Neighborhoods
MF GO:0000254 C-4 methylsterol oxidase activity IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001736 establishment of planar polarity IEP Predict GO terms from Neighborhoods
BP GO:0001737 establishment of imaginal disc-derived wing hair orientation IEP Predict GO terms from Neighborhoods
CC GO:0002178 palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
MF GO:0004048 anthranilate phosphoribosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005342 organic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
CC GO:0005938 cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006576 cellular biogenic amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006809 nitric oxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006878 cellular copper ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0007164 establishment of tissue polarity IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0008203 cholesterol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008569 minus-end-directed microtubule motor activity IEP Predict GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Predict GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid family metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009639 response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0009640 photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009798 axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
CC GO:0009921 auxin efflux carrier complex IEP Predict GO terms from Neighborhoods
MF GO:0009924 octadecanal decarbonylase activity IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0009942 longitudinal axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009943 adaxial/abaxial axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009947 centrolateral axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009956 radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009958 positive gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009965 leaf morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0009986 cell surface IEP Predict GO terms from Neighborhoods
MF GO:0010011 auxin binding IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010052 guard cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010065 primary meristem tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010067 procambium histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010114 response to red light IEP Predict GO terms from Neighborhoods
BP GO:0010229 inflorescence development IEP Predict GO terms from Neighborhoods
BP GO:0010252 auxin homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010315 auxin export across the plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0010328 auxin influx transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010338 leaf formation IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010372 positive regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010482 regulation of epidermal cell division IEP Predict GO terms from Neighborhoods
BP GO:0010540 basipetal auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0010654 apical cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Predict GO terms from Neighborhoods
BP GO:0010865 stipule development IEP Predict GO terms from Neighborhoods
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015186 L-glutamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015386 potassium:proton antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016049 cell growth IEP Predict GO terms from Neighborhoods
CC GO:0016328 lateral plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predict GO terms from Neighborhoods
MF GO:0016662 oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
BP GO:0016926 protein desumoylation IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
MF GO:0022821 solute:potassium antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
CC GO:0030140 trans-Golgi network transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0031534 minus-end directed microtubule sliding IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0032881 regulation of polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032973 amino acid export across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0033240 positive regulation of cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0042138 meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042435 indole-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Predict GO terms from Neighborhoods
BP GO:0043090 amino acid import IEP Predict GO terms from Neighborhoods
BP GO:0043201 response to leucine IEP Predict GO terms from Neighborhoods
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043849 Ras palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0044106 cellular amine metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
CC GO:0045179 apical cortex IEP Predict GO terms from Neighborhoods
BP GO:0045764 positive regulation of cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046209 nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046219 indolalkylamine biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048104 establishment of body hair or bristle planar orientation IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048507 meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048508 embryonic meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048532 anatomical structure arrangement IEP Predict GO terms from Neighborhoods
BP GO:0048588 developmental cell growth IEP Predict GO terms from Neighborhoods
BP GO:0048589 developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048598 embryonic morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048756 sieve cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048767 root hair elongation IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048830 adventitious root development IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050421 nitrite reductase (NO-forming) activity IEP Predict GO terms from Neighborhoods
BP GO:0050801 ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0050830 defense response to Gram-positive bacterium IEP Predict GO terms from Neighborhoods
BP GO:0051012 microtubule sliding IEP Predict GO terms from Neighborhoods
BP GO:0051026 chiasma assembly IEP Predict GO terms from Neighborhoods
BP GO:0051211 anisotropic cell growth IEP Predict GO terms from Neighborhoods
BP GO:0055065 metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055073 cadmium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0060026 convergent extension IEP Predict GO terms from Neighborhoods
BP GO:0060027 convergent extension involved in gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0060560 developmental growth involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0060919 auxin import into cell IEP Predict GO terms from Neighborhoods
MF GO:0061578 Lys63-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
BP GO:0062013 positive regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
MF GO:0071771 aldehyde decarbonylase activity IEP Predict GO terms from Neighborhoods
BP GO:0072507 divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072697 protein localization to cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0072699 protein localization to cortical microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0080052 response to histidine IEP Predict GO terms from Neighborhoods
BP GO:0080053 response to phenylalanine IEP Predict GO terms from Neighborhoods
BP GO:0080064 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation IEP Predict GO terms from Neighborhoods
BP GO:0080065 4-alpha-methyl-delta7-sterol oxidation IEP Predict GO terms from Neighborhoods
MF GO:0080161 auxin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080162 endoplasmic reticulum to cytosol auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0080166 stomium development IEP Predict GO terms from Neighborhoods
BP GO:0090057 root radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0090358 positive regulation of tryptophan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090436 leaf pavement cell development IEP Predict GO terms from Neighborhoods
BP GO:0090451 cotyledon boundary formation IEP Predict GO terms from Neighborhoods
BP GO:0090506 axillary shoot meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0090603 sieve element differentiation IEP Predict GO terms from Neighborhoods
CC GO:0098590 plasma membrane region IEP Predict GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0098809 nitrite reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
CC GO:0099738 cell cortex region IEP Predict GO terms from Neighborhoods
BP GO:0140115 export across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Predict GO terms from Neighborhoods
BP GO:1901332 negative regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902459 positive regulation of stem cell population maintenance IEP Predict GO terms from Neighborhoods
CC GO:1903958 nitric-oxide synthase complex IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:1990465 aldehyde oxygenase (deformylating) activity IEP Predict GO terms from Neighborhoods
BP GO:2000023 regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:2000036 regulation of stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
BP GO:2000603 regulation of secondary growth IEP Predict GO terms from Neighborhoods
BP GO:2000605 positive regulation of secondary growth IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036443 Znf_RanBP2_sf 2 33
IPR036443 Znf_RanBP2_sf 125 162
IPR001876 Znf_RanBP2 132 161
IPR001876 Znf_RanBP2 61 88
IPR001876 Znf_RanBP2 3 30
IPR036443 Znf_RanBP2_sf 57 93
No external refs found!