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  5. SOLTUB.AGRIA.G00000028230

SOLTUB.AGRIA.G00000028230


Description : RNA-binding 48


Gene families : OG_02_0016130 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028230
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_171


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002521 leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002573 myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predict GO terms from Neighborhoods
BP GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IEP Predict GO terms from Neighborhoods
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEP Predict GO terms from Neighborhoods
BP GO:0006935 chemotaxis IEP Predict GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0016477 cell migration IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0019003 GDP binding IEP Predict GO terms from Neighborhoods
CC GO:0019005 SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030593 neutrophil chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0030595 leukocyte chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0030851 granulocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predict GO terms from Neighborhoods
BP GO:0031017 exocrine pancreas development IEP Predict GO terms from Neighborhoods
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
BP GO:0040011 locomotion IEP Predict GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Predict GO terms from Neighborhoods
BP GO:0042330 taxis IEP Predict GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Predict GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Predict GO terms from Neighborhoods
BP GO:0048732 gland development IEP Predict GO terms from Neighborhoods
BP GO:0048870 cell motility IEP Predict GO terms from Neighborhoods
BP GO:0050900 leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0060326 cell chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071621 granulocyte chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0097529 myeloid leukocyte migration IEP Predict GO terms from Neighborhoods
BP GO:0097530 granulocyte migration IEP Predict GO terms from Neighborhoods
BP GO:1990266 neutrophil migration IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035979 RBD_domain_sf 8 99
IPR000504 RRM_dom 23 92
No external refs found!