SOLTUB.AGRIA.G00000028282


Description : Coiled-coil domain-containing protein 25


Gene families : OG_02_0016146 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028282
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005887 integral component of plasma membrane IEA AHRD
CC GO:0012505 endomembrane system IEA AHRD
BP GO:2000147 positive regulation of cell motility IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0000913 preprophase band assembly IEP Predict GO terms from Neighborhoods
MF GO:0000993 RNA polymerase II complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001139 RNA polymerase II complex recruiting activity IEP Predict GO terms from Neighborhoods
BP GO:0001192 maintenance of transcriptional fidelity during transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0001193 maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0001558 regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0001933 negative regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0003711 transcription elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004860 protein kinase inhibitor activity IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005814 centriole IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0006362 transcription elongation by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006469 negative regulation of protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
BP GO:0009304 tRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0009574 preprophase band IEP Predict GO terms from Neighborhoods
BP GO:0009645 response to low light intensity stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0010162 seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:0010202 response to low fluence red light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0016128 phytosteroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016131 brassinosteroid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016234 inclusion body IEP Predict GO terms from Neighborhoods
MF GO:0019210 kinase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0019897 extrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Predict GO terms from Neighborhoods
BP GO:0022611 dormancy process IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030218 erythrocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030292 protein tyrosine kinase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0030863 cortical cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0030981 cortical microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0031440 regulation of mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031554 regulation of termination of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0031564 transcription antitermination IEP Predict GO terms from Neighborhoods
BP GO:0032069 regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032075 positive regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0033673 negative regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0042405 nuclear inclusion body IEP Predict GO terms from Neighborhoods
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0043175 RNA polymerase core enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0045898 regulation of RNA polymerase II transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0045899 positive regulation of RNA polymerase II transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046620 regulation of organ growth IEP Predict GO terms from Neighborhoods
BP GO:0046621 negative regulation of organ growth IEP Predict GO terms from Neighborhoods
MF GO:0046625 sphingolipid binding IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048640 negative regulation of developmental growth IEP Predict GO terms from Neighborhoods
MF GO:0050275 scopoletin glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051338 regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051643 endoplasmic reticulum localization IEP Predict GO terms from Neighborhoods
BP GO:0060260 regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060700 regulation of ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0061817 endoplasmic reticulum-plasma membrane tethering IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071219 cellular response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0071222 cellular response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080046 quercetin 4'-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0090158 endoplasmic reticulum membrane organization IEP Predict GO terms from Neighborhoods
MF GO:0097001 ceramide binding IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Predict GO terms from Neighborhoods
BP GO:1901917 regulation of exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1901919 positive regulation of exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1904245 regulation of polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1904247 positive regulation of polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1905777 regulation of exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1905779 positive regulation of exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:2000142 regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008532 NFACT_RNA-bd 1 112
No external refs found!