SOLTUB.AGRIA.G00000028386


Description : embryo defective 1923


Gene families : OG_02_0031810 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028386
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_39


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0001817 regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0001819 positive regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0001934 positive regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0004072 aspartate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004412 homoserine dehydrogenase activity IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006553 lysine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006566 threonine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009085 lysine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009088 threonine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predict GO terms from Neighborhoods
BP GO:0009090 homoserine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009092 homoserine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0019202 amino acid kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030334 regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
MF GO:0030545 signaling receptor regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0030546 signaling receptor activator activity IEP Predict GO terms from Neighborhoods
BP GO:0040012 regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042327 positive regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0043270 positive regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045937 positive regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046451 diaminopimelate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0048018 receptor ligand activity IEP Predict GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Predict GO terms from Neighborhoods
BP GO:0071470 cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901796 regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901797 negative regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902532 negative regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:2000145 regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001021 negative regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!