SOLTUB.AGRIA.G00000028443

Description : Polyphenol oxidase, chloroplastic

Gene families : OG_02_0010170 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028443
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_253

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004097	catechol oxidase activity	IEA	AHRD
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005775	vacuolar lumen	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009536	plastid	IEA	AHRD
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009806	lignan metabolic process	None	Extended
BP	GO:0009807	lignan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	None	Extended
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
MF	GO:0033793	aureusidin synthase activity	IEA	AHRD
BP	GO:0042440	pigment metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	IEA	AHRD
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0046992	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond	None	Extended
MF	GO:0046993	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901708	(+)-3'-hydroxylarreatricin biosynthetic process	IEA	AHRD
BP	GO:1901709	(+)-larreatricin metabolic process	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000012	single strand break repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001709	cell fate determination	IEP	Predict GO terms from Neighborhoods
BP	GO:0002215	defense response to nematode	IEP	Predict GO terms from Neighborhoods
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005504	fatty acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006783	heme biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
MF	GO:0008409	5'-3' exonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009269	response to desiccation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009277	fungal-type cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009531	secondary cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009809	lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009827	plant-type cell wall modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0009897	external side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009900	dehiscence	IEP	Predict GO terms from Neighborhoods
CC	GO:0009930	longitudinal side of cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010266	response to vitamin B1	IEP	Predict GO terms from Neighborhoods
MF	GO:0010313	phytochrome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010345	suberin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010455	positive regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0010500	transmitting tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010981	regulation of cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015485	cholesterol binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0015690	aluminum cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016819	hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030154	cell differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0030445	yeast-form cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0030900	forebrain development	IEP	Predict GO terms from Neighborhoods
MF	GO:0030983	mismatched DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031012	extracellular matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0031155	regulation of reproductive fruiting body development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031520	plasma membrane of cell tip	IEP	Predict GO terms from Neighborhoods
MF	GO:0032934	sterol binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0033699	DNA 5'-adenosine monophosphate hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034410	cell wall beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034634	glutathione transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034635	glutathione transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034775	glutathione transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035443	tripeptide transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035672	oligopeptide transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042349	guiding stereospecific synthesis activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0043667	pollen wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044347	cell wall polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0047627	adenylylsulfatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047911	galacturan 1,4-alpha-galacturonidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0048226	Casparian strip	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048609	multicellular organismal reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048658	anther wall tapetum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0052324	plant-type cell wall cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0072349	modified amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0075260	regulation of spore-bearing organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080001	mucilage extrusion from seed coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0090058	metaxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090059	protoxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090227	regulation of red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090229	negative regulation of red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0098552	side of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098709	glutathione import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098869	cellular oxidant detoxification	IEP	Predict GO terms from Neighborhoods
MF	GO:0102910	dirigent protein activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140205	oligopeptide import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140207	tripeptide import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1901141	regulation of lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901348	positive regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901503	ether biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901583	tetrapeptide import across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:1901584	tetrapeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901598	(-)-pinoresinol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901599	(-)-pinoresinol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903340	positive regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1990058	fruit replum development	IEP	Predict GO terms from Neighborhoods
MF	GO:1990165	single-strand break-containing DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990388	xylem-to-phloem iron transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR008922	Di-copper_centre_dom_sf	87	408
IPR022740	Polyphenol_oxidase_C	434	568
IPR022739	Polyphenol_oxidase_cen	367	413
IPR002227	Tyrosinase_Cu-bd	166	369

External Links

No external refs found!

SOLTUB.AGRIA.G00000028443

Expression Profile

Co-expression Networks

Functional Annotation