SOLTUB.AGRIA.G00000028584

Description : AMP dependent ligase, putative

Gene families : OG_02_0001054 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028584
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003987	acetate-CoA ligase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005777	peroxisome	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006083	acetate metabolic process	IEA	AHRD
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006690	icosanoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009403	toxin biosynthetic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009803	cinnamic acid metabolic process	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010597	green leaf volatile biosynthetic process	IEA	AHRD
MF	GO:0015645	fatty acid ligase activity	None	Extended
BP	GO:0016143	S-glycoside metabolic process	None	Extended
BP	GO:0016144	S-glycoside biosynthetic process	None	Extended
MF	GO:0016207	4-coumarate-CoA ligase activity	IEA	AHRD
MF	GO:0016405	CoA-ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	None	Extended
MF	GO:0016878	acid-thiol ligase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0018858	benzoate-CoA ligase activity	IEA	AHRD
BP	GO:0019372	lipoxygenase pathway	None	Extended
BP	GO:0019605	butyrate metabolic process	IEA	AHRD
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	IEA	AHRD
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
CC	GO:0042579	microbody	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
MF	GO:0043759	methylbutanoate-CoA ligase activity	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046459	short-chain fatty acid metabolic process	None	Extended
MF	GO:0047760	butyrate-CoA ligase activity	IEA	AHRD
BP	GO:0048511	rhythmic process	None	Extended
MF	GO:0050218	propionate-CoA ligase activity	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0052314	phytoalexin metabolic process	None	Extended
BP	GO:0052315	phytoalexin biosynthetic process	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0106286	(E)-caffeate-CoA ligase activity	IEA	AHRD
MF	GO:0106290	trans-cinnamate-CoA ligase activity	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901659	glycosyl compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000429	carbon catabolite regulation of transcription from RNA polymerase II promoter	IEP	Predict GO terms from Neighborhoods
BP	GO:0000436	carbon catabolite activation of transcription from RNA polymerase II promoter	IEP	Predict GO terms from Neighborhoods
CC	GO:0000803	sex chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0001741	XY body	IEP	Predict GO terms from Neighborhoods
BP	GO:0002084	protein depalmitoylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004321	fatty-acyl-CoA synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004563	beta-N-acetylhexosaminidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004713	protein tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004714	transmembrane receptor protein tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005351	carbohydrate:proton symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005354	galactose transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005365	myo-inositol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005366	myo-inositol:proton symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005402	carbohydrate:cation symporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005880	nuclear microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0006337	nucleosome disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0006491	N-glycan processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006517	protein deglycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006743	ubiquinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006820	anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006935	chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007231	osmosensory signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007349	cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007391	dorsal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0008272	sulfate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008286	insulin receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0008306	associative learning	IEP	Predict GO terms from Neighborhoods
MF	GO:0008418	protein-N-terminal asparagine amidohydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009652	thigmotropism	IEP	Predict GO terms from Neighborhoods
MF	GO:0009679	hexose:proton symporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009705	plant-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009887	animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009970	cellular response to sulfate starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010342	endosperm cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010344	seed oilbody biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010455	positive regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
MF	GO:0015166	polyol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015517	galactose:proton symporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015757	galactose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015791	polyol transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015798	myo-inositol transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015802	basic amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015819	lysine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015822	ornithine transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015929	hexosaminidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016231	beta-N-acetylglucosaminidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016331	morphogenesis of embryonic epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0016408	C-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016514	SWI/SNF complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0016586	RSC-type complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predict GO terms from Neighborhoods
CC	GO:0030426	growth cone	IEP	Predict GO terms from Neighborhoods
CC	GO:0030427	site of polarized growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0031302	intrinsic component of endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031494	regulation of mating type switching	IEP	Predict GO terms from Neighborhoods
BP	GO:0031496	positive regulation of mating type switching	IEP	Predict GO terms from Neighborhoods
BP	GO:0031670	cellular response to nutrient	IEP	Predict GO terms from Neighborhoods
BP	GO:0032006	regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032986	protein-DNA complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033494	ferulate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035112	genitalia morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035126	post-embryonic genitalia morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035601	protein deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0040011	locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042157	lipoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042159	lipoprotein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042330	taxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042595	behavioral response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043476	pigment accumulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0043480	pigment accumulation in tissues	IEP	Predict GO terms from Neighborhoods
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0045595	regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045596	negative regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045990	carbon catabolite regulation of transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045991	carbon catabolite activation of transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0048497	maintenance of floral organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048563	post-embryonic animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048805	imaginal disc-derived genitalia morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0050563	trans-feruloyl-CoA synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051019	mitogen-activated protein kinase binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0055038	recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0071564	npBAF complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0071565	nBAF complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0071683	sensory dendrite	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0089718	amino acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090700	maintenance of plant organ identity	IEP	Predict GO terms from Neighborhoods
CC	GO:0097386	glial cell projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0097449	astrocyte projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0097450	astrocyte end-foot	IEP	Predict GO terms from Neighborhoods
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098657	import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0098734	macromolecule depalmitoylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098739	import across plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098936	intrinsic component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098948	intrinsic component of postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098949	intrinsic component of postsynaptic endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098951	intrinsic component of postsynaptic recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099025	anchored component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099030	anchored component of postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099031	anchored component of postsynaptic density membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099033	anchored component of postsynaptic recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099034	anchored component of postsynaptic endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099144	anchored component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099146	intrinsic component of postsynaptic density membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099175	regulation of postsynapse organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0099240	intrinsic component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901799	negative regulation of proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902003	regulation of amyloid-beta formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902004	positive regulation of amyloid-beta formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902022	L-lysine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902473	regulation of protein localization to synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:1902816	regulation of protein localization to microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:1902817	negative regulation of protein localization to microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:1902950	regulation of dendritic spine maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:1902991	regulation of amyloid precursor protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902993	positive regulation of amyloid precursor protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903352	L-ornithine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903401	L-lysine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903826	L-arginine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904679	myo-inositol import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1905666	regulation of protein localization to endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1905668	positive regulation of protein localization to endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1990822	basic amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000035	regulation of stem cell division	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR025110	AMP-bd_C	460	534
IPR000873	AMP-dep_Synth/Lig	20	451

External Links

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SOLTUB.AGRIA.G00000028584

Expression Profile

Co-expression Networks

Functional Annotation