SOLTUB.AGRIA.G00000028650

Description : Disease resistance protein RGA2

Gene families : OG_02_0000042 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028650
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000028610	No alias	Disease resistance protein RGA2	0.06	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028610	No alias	Disease resistance protein RGA2	0.06	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028610	No alias	Disease resistance protein RGA2	0.06	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0010033	response to organic substance	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
MF	GO:0043531	ADP binding	IEA	AHRD
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001508	action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0002027	regulation of heart rate	IEP	Predict GO terms from Neighborhoods
BP	GO:0002028	regulation of sodium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0002252	immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002679	respiratory burst involved in defense response	IEP	Predict GO terms from Neighborhoods
MF	GO:0004566	beta-glucuronidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006937	regulation of muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006942	regulation of striated muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007009	plasma membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007409	axonogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008157	protein phosphatase 1 binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0009615	response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009626	plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
CC	GO:0009925	basal plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010765	positive regulation of sodium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010882	regulation of cardiac muscle contraction by calcium ion signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0019208	phosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031672	A band	IEP	Predict GO terms from Neighborhoods
BP	GO:0034050	programmed cell death induced by symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0042060	wound healing	IEP	Predict GO terms from Neighborhoods
CC	GO:0042383	sarcolemma	IEP	Predict GO terms from Neighborhoods
BP	GO:0043067	regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043069	negative regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043268	positive regulation of potassium ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0044304	main axon	IEP	Predict GO terms from Neighborhoods
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
BP	GO:0050808	synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051279	regulation of release of sequestered calcium ion into cytosol	IEP	Predict GO terms from Neighborhoods
BP	GO:0051282	regulation of sequestering of calcium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051607	defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0051865	protein autoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0051928	positive regulation of calcium ion transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0052748	baicalin beta-D-glucuronidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055117	regulation of cardiac muscle contraction	IEP	Predict GO terms from Neighborhoods
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0086001	cardiac muscle cell action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0086002	cardiac muscle cell action potential involved in contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0086004	regulation of cardiac muscle cell contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0086015	SA node cell action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0086065	cell communication involved in cardiac conduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0086066	atrial cardiac muscle cell to AV node cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0098900	regulation of action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0098901	regulation of cardiac muscle cell action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0140546	defense response to symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:1901016	regulation of potassium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901019	regulation of calcium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903115	regulation of actin filament-based movement	IEP	Predict GO terms from Neighborhoods
BP	GO:1990089	response to nerve growth factor	IEP	Predict GO terms from Neighborhoods
BP	GO:1990090	cellular response to nerve growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	161	395
IPR041118	Rx_N	6	84
IPR001611	Leu-rich_rpt	857	912
IPR027417	P-loop_NTPase	137	409

External Links

No external refs found!

SOLTUB.AGRIA.G00000028650

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation